RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Pcsk9Q80W65 694 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Hsfy2Q80Y37 392 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Fmo9Q8C116 539 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Fam78aQ8C552 283 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Snx8Q8CFD4 459 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Nle1Q8VEJ4 485 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Olfr665Q8VG79 316 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 PacrglQ9D3X5 248 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Erap1Q9EQH2 930 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 NckipsdQ9ESJ4 714 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Trpc4apQ9JLV2 797 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 M1apQ9Z0E1 529 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Scn8aQ9WTU3 1978 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gm3604A0A087WPN2 559 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f15A0A087WR44 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f12A0A0A0MQP3 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Mroh7A2AVR2 1279 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Kcng1A2BDX4 514 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f9A2BFZ7 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f7A2BHG6 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ssxb6A2BI74 170 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f19A2CG71 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f10A2CG92 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f3A2CGC2 496 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f13B8JKF6 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Kbtbd6E9PYD7 486 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Kbtbd7G5E8C2 690 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f2J3QMS5 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f25J3QMV9 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f6J3QMW9 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f26J3QNK2 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f24J3QNQ5 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f8J3QQ50 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f17L7MU81 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f18L7MU83 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Pax3P24610 479 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Acvr2bP27040 536 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Agtr2P35374 363 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f14Q1LZI5 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 BtrcQ3ULA2 605 aaKnown RBP18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Cep295nlQ497N6 533 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Btbd35f27Q5FWA1 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Brsk2Q69Z98 735 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Magee1Q6PCZ4 918 aaKnown RBP18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 InavaQ7TN12 663 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Frs2Q8C180 508 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Zswim3Q8CFL8 695 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Rbmx2Q8R0F5 326 aaKnown RBP18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 ClyblQ8R4N0 338 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 HnrnprQ8VHM5 632 aaKnown RBP18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 MvdQ99JF5 401 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ddx50Q99MJ9 734 aaKnown RBP18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 GMCL1P1Q99N64 498 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Lyrm1Q9CQB7 122 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Fbxo17Q9QZM8 286 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gm3739L7N296 216 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Aif1O70200 147 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Krt1P04104 637 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Enpp1P06802 906 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Sorbs2Q3UTJ2 1180 aaKnown RBP18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Akr1clQ3UXL1 322 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Lrrc8eQ66JT1 795 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 RadilQ69Z89 1099 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Mtmr12Q80TA6 747 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gpr139Q80UC8 345 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Psapl1Q8C1C1 522 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Fem1cQ8CEF1 617 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Batf2Q8R1H8 277 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Impg1Q8R1W8 798 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Vps35Q9EQH3 796 aaKnown RBP18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Slc7a8Q9QXW9 531 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Olfr1200A2ATJ4 336 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gm3383J3QQ59 259 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gm3239L7N2D9 227 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ptpn20O55082 426 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Dnmt3aO88508 908 aaKnown RBP18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Timm13P62075 95 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 F8a1Q00558 380 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Prickle1Q3U5C7 832 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Lrrc58Q3UGP9 366 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Esrp1Q3US41 680 aaKnown RBP18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Cfap97Q6ZPR1 541 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Rpl10Q6ZWV3 214 aaKnown RBP18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 RhoqQ8R527 205 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ilf2Q9CXY6 390 aaKnown RBP18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Rrp15Q9CYX7 281 aaKnown RBP18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Batf3Q9D275 118 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 4933425L06RikQ9D3Z8 585 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 ScelQ9EQG3 652 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Htr3bQ9JHJ5 437 aa18.67■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 JunbP09450 344 aaKnown RBP18.66■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Hspa8P63017 646 aaKnown RBP18.66■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Fmo5P97872 533 aa18.66■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Tekt4Q149S1 447 aa18.66■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Kctd21Q3URF8 260 aa18.66■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Afg1lQ3V384 480 aa18.66■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Kir3dl2Q673W2 388 aa18.66■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ubtd2Q6PGH0 234 aa18.66■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 RubcnQ80U62 956 aa18.66■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Tmcc2Q80W04 706 aa18.66■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms