RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TBATAQ96M53 351 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 FCRL3Q96P31 734 aaPredicted RBP12.28□□□□□ -0.44
LINC00339-213ENST00000642137 WDR83Q9BRX9 315 aaKnown RBP12.28□□□□□ -0.44
LINC00339-213ENST00000642137 LRFN3Q9BTN0 628 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 C1QTNF7Q9BXJ2 289 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 TXLNGYQ9BZA5 131 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 DUSP15Q9H1R2 295 aaPredicted RBP12.28□□□□□ -0.44
LINC00339-213ENST00000642137 IL26Q9NPH9 171 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 SLC2A6Q9UGQ3 507 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 DMTF1Q9Y222 760 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 HS3ST3A1Q9Y663 406 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 BDP1A6H8Y1 2624 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 SCN8AQ9UQD0 1980 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 TRIOO75962 3097 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 TTC28Q96AY4 2481 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 ZCWPW2A0A1B0GU75 182 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 HRO43593 1189 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 FSBPO95073 299 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 SLC4A1P02730 911 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 IGHV4-34P06331 123 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 PYGLP06737 847 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 BCKDHBP21953 392 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 MAT2AP31153 395 aaKnown RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 ARCN1P48444 511 aaKnown RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 RPL6Q02878 288 aaKnown RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 PEX6Q13608 980 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 LRRC14Q15048 493 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 BRD3Q15059 726 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 KYNUQ16719 465 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 SETMARQ53H47 684 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 HENMT1Q5T8I9 393 aaKnown RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 KIAA0930Q6ICG6 404 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 EMBQ6PCB8 327 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 UNC5AQ6ZN44 842 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 C3orf62Q6ZUJ4 267 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 TRMT10CQ7L0Y3 403 aaKnown RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 TRAM1L1Q8N609 369 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 TP53I13Q8NBR0 393 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 DENND6BQ8NEG7 585 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 GSDMBQ8TAX9 411 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 ZNF398Q8TD17 642 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 KLK6Q92876 244 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 HDAC10Q969S8 669 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 ZNF669Q96BR6 464 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 BIRC7Q96CA5 298 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 AP2M1Q96CW1 435 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 NUS1Q96E22 293 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 C9orf72Q96LT7 481 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 TTC25Q96NG3 672 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 PRRX2Q99811 253 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 CDC42EP4Q9H3Q1 356 aaKnown RBP12.27□□□□□ -0.45
LINC00339-213ENST00000642137 LRRC4CQ9HCJ2 640 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 FKBPLQ9UIM3 349 aa12.27□□□□□ -0.45
LINC00339-213ENST00000642137 GLYATL1P3A0A0U1RQE8 302 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 A0A1W2PPC4 97 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 CCDC78A2IDD5 438 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 CCDC162PA2VCL2 907 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 AGAP14A8MT82 685 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 SLC31A1O15431 190 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 LILRB5O75023 590 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 SPAG6O75602 509 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 SRP72O76094 671 aaKnown RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 VAPBO95292 243 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 GOT2P00505 430 aaKnown RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 HNRNPA2B1P22626 353 aaKnown RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 TEAD1P28347 426 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 SSTR1P30872 391 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 MC4RP32245 332 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 ARSDP51689 593 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 PMS2P54278 862 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 GPX6P59796 221 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 PRAMEP78395 509 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 ITGA9Q13797 1035 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 CRYMQ14894 314 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 LONRF1Q17RB8 773 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 WSCD2Q2TBF2 565 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 MAP9Q49MG5 647 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 GPR33Q49SQ1 333 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 PDPK2PQ6A1A2 396 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 PNCKQ6P2M8 343 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 ZNF449Q6P9G9 518 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 LPCAT2Q7L5N7 544 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 SNX20Q7Z614 316 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 LMNTD2Q8IXW0 634 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 GSPT2Q8IYD1 628 aaKnown RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 OR6P1Q8NGX9 317 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 OR4L1Q8NH43 312 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 AENQ8WTP8 325 aaKnown RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 SCAMP4Q969E2 229 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 CAVIN3Q969G5 261 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 CFAP36Q96G28 342 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 ZC3H10Q96K80 434 aaKnown RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 KLF6Q99612 283 aaPredicted RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 TRIM56Q9BRZ2 755 aaKnown RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 ZSCAN5AQ9BUG6 496 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 RIOK2Q9BVS4 552 aaKnown RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 SEMA4AQ9H3S1 761 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 SUDS3Q9H7L9 328 aaPredicted RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 EBF2Q9HAK2 575 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms