RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TMPRSS15P98073 1019 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 CDK16Q00536 496 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 DPTQ07507 201 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 PDE1CQ14123 709 aaPredicted RBP13.15□□□□□ -0.3
GTF3A-209ENST00000640289 HENMT1Q5T8I9 393 aaKnown RBP13.15□□□□□ -0.3
GTF3A-209ENST00000640289 LRRC8BQ6P9F7 803 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 PRR23CQ6ZRP0 262 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 ZNF765Q7L2R6 523 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 CAND1Q86VP6 1230 aaKnown RBP13.15□□□□□ -0.3
GTF3A-209ENST00000640289 IQCHQ86VS3 1027 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 PPIL6Q8IXY8 311 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 RAVER1Q8IY67 606 aaKnown RBP13.15□□□□□ -0.3
GTF3A-209ENST00000640289 FUBP1Q96AE4 644 aaKnown RBP13.15□□□□□ -0.3
GTF3A-209ENST00000640289 APOOQ9BUR5 198 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 LGR4Q9BXB1 951 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 DPH5Q9H2P9 285 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 GPR27Q9NS67 375 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 KCTD5Q9NXV2 234 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 SNX24Q9Y343 169 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 GPR179Q6PRD1 2367 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 TRPM6Q9BX84 2022 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 CTAGE15A4D2H0 777 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 RGSL1A5PLK6 1076 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 FAM187AA6NFU0 413 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 FADS2P1A8MWK0 482 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 GPR39O43194 453 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 CTAGE8P0CG41 777 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 TSHRP16473 764 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 MGAT1P26572 445 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 TRIM23P36406 574 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 SPAM1P38567 509 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
GTF3A-209ENST00000640289 RABIFP47224 123 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 ZNF140P52738 457 aaPredicted RBP13.14□□□□□ -0.31
GTF3A-209ENST00000640289 DNTTIP2Q5QJE6 756 aaKnown RBP13.14□□□□□ -0.31
GTF3A-209ENST00000640289 MAATS1Q7Z4T9 603 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 CTAGE6Q86UF2 777 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 NLRP8Q86W28 1048 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 HEATR4Q86WZ0 1026 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 CTAGE4Q8IX94 777 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 NOA1Q8NC60 698 aaKnown RBP13.14□□□□□ -0.31
GTF3A-209ENST00000640289 MCUQ8NE86 351 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 SKA1Q96BD8 255 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 FAM122AQ96E09 287 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 DNAJC1Q96KC8 554 aaKnown RBP13.14□□□□□ -0.31
GTF3A-209ENST00000640289 ZNF778Q96MU6 729 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 SERPINB12Q96P63 405 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 LRRC1Q9BTT6 524 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 GTPBP2Q9BX10 602 aaKnown RBP13.14□□□□□ -0.31
GTF3A-209ENST00000640289 CARD6Q9BX69 1037 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 SPATA16Q9BXB7 569 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 WDR26Q9H7D7 661 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 IL21RQ9HBE5 538 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 IL26Q9NPH9 171 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 SYBUQ9NX95 663 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 FKBPLQ9UIM3 349 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 PNMA8BQ9ULN7 279 aaPredicted RBP13.14□□□□□ -0.31
GTF3A-209ENST00000640289 PKP3Q9Y446 797 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 SDK1Q7Z5N4 2213 aa13.14□□□□□ -0.31
GTF3A-209ENST00000640289 DOCK9Q9BZ29 2069 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 SPTY2D1-AS1A0A0U1RR47 76 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 GAPDHSO14556 408 aaPredicted RBP13.13□□□□□ -0.31
GTF3A-209ENST00000640289 INPP4BO15327 924 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 GDF9O60383 454 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 SEC31AO94979 1220 aaKnown RBP13.13□□□□□ -0.31
GTF3A-209ENST00000640289 CA5AP35218 305 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 PLA2G5P39877 138 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 THOP1P52888 689 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 ITGA8P53708 1063 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 DCDC1P59894 354 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 YPEL5P62699 121 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 SARNPP82979 210 aaKnown RBP13.13□□□□□ -0.31
GTF3A-209ENST00000640289 CDK3Q00526 305 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 OVGP1Q12889 678 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 FZD2Q14332 565 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 HLA-BQ31612 363 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 AASDHQ4L235 1098 aaPredicted RBP13.13□□□□□ -0.31
GTF3A-209ENST00000640289 ZNF542PQ5EBM4 170 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 KCTD16Q68DU8 428 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 HIBCHQ6NVY1 386 aaPredicted RBP13.13□□□□□ -0.31
GTF3A-209ENST00000640289 C8orf74Q6P047 294 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 FAM151BQ6UXP7 276 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 PCGF5Q86SE9 256 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 TRIM74Q86UV6 250 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 MPP5Q8N3R9 675 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 MMGT1Q8N4V1 131 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 TRAM1L1Q8N609 369 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 CEP112Q8N8E3 955 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 FAM174AQ8TBP5 190 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 SNF8Q96H20 258 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 PWWP2AQ96N64 755 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 PLEKHG4BQ96PX9 1271 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 RANBP9Q96S59 729 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 ERP44Q9BS26 406 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 EDEM2Q9BV94 578 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 GAREM1Q9H706 876 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 GDF3Q9NR23 364 aa13.13□□□□□ -0.31
GTF3A-209ENST00000640289 CHRAC1Q9NRG0 131 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms