RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	MAFA	Q8NHW3	353 aa	Predicted RBP	11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	ISL2	Q96A47	359 aa		11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	RAB7B	Q96AH8	199 aa		11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	SELENOS	Q9BQE4	189 aa		11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	INTS10	Q9NVR2	710 aa	Known RBP	11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	PKD2L2	Q9NZM6	624 aa		11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	DUSP12	Q9UNI6	340 aa		11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	BPTF	Q12830	3046 aa		11.74	□□□□□ -0.53
CLN6-223	ENST00000637823	SHISA7	A6NL88	538 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823		A6NNZ2	444 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823		H0Y858	1186 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	NDUFS3	O75489	264 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	SRP72	O76094	671 aa	Known RBP	11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	MPO	P05164	745 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	C1S	P09871	688 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	ADRB3	P13945	408 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	C5AR1	P21730	350 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	LHCGR	P22888	699 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	TYK2	P29597	1187 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	SPAM1	P38567	509 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	MMP12	P39900	470 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	PSMD8	P48556	350 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	SPINT3	P49223	89 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	TTPA	P49638	278 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	SERPINB8	P50452	374 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	ATP1A2	P50993	1020 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	CLCN5	P51795	746 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	NEK3	P51956	506 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	GYS2	P54840	703 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	POU4F1	Q01851	419 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	SEMG2	Q02383	582 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	PRKCQ	Q04759	706 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	MLF2	Q15773	248 aa	Predicted RBP	11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	CST6	Q15828	149 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	POM121L1P	Q3SYA9	428 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	TUBB8	Q3ZCM7	444 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	GPR33	Q49SQ1	333 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	TMEM52B	Q4KMG9	183 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	LRRC73	Q5JTD7	316 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	IER5L	Q5T953	404 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	RNF187	Q5TA31	235 aa	Predicted RBP	11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	LYPLAL1	Q5VWZ2	237 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	ZNF776	Q68DI1	518 aa	Predicted RBP	11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	CNST	Q6PJW8	725 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	LIPI	Q6XZB0	460 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	CERS6	Q6ZMG9	384 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	TAS2R42	Q7RTR8	314 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	SNX20	Q7Z614	316 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	C4orf33	Q8N1A6	199 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	BANP	Q8N9N5	519 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	TXNDC5	Q8NBS9	432 aa	Known RBP	11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	GPR26	Q8NDV2	337 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	DTX3L	Q8TDB6	740 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	CABS1	Q96KC9	395 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	PLEKHG4B	Q96PX9	1271 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	TTC1	Q99614	292 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	TRPM6	Q9BX84	2022 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	CDH19	Q9H159	772 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	IL26	Q9NPH9	171 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	ADAM21	Q9UKJ8	722 aa		11.73	□□□□□ -0.53
CLN6-223	ENST00000637823	GLYATL1P3	A0A0U1RQE8	302 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	FAM95C	A0A1B0GW59	222 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	TMEM120B	A0PK00	339 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	FAM47DP	A6NHR8	397 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	GOLGA8R	I6L899	631 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	PSMD11	O00231	422 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	GAPDHS	O14556	408 aa	Predicted RBP	11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	COPE	O14579	308 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	TPP1	O14773	563 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	AREL1	O15033	823 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	TYROBP	O43914	113 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	ADAM23	O75077	832 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	SPAG7	O75391	227 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	ALDOA	P04075	364 aa	Known RBP	11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	F7	P08709	466 aa	Predicted RBP	11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	HOXB2	P14652	356 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	ITGAL	P20701	1170 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	CCNF	P41002	786 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	P2RY2	P41231	377 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	MAGEA12	P43365	314 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	ABCG1	P45844	678 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	CCT5	P48643	541 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	METAP1	P53582	386 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	DCDC1	P59894	354 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	RPS14	P62263	151 aa	Known RBP	11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	CBX1	P83916	185 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	ZP2	Q05996	745 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	CNTN1	Q12860	1018 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	RALGDS	Q12967	914 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	CCIN	Q13939	588 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	SEMA3A	Q14563	771 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	USP10	Q14694	798 aa	Known RBP	11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	CHRNA6	Q15825	494 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	ZNF789	Q5FWF6	425 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	EOGT	Q5NDL2	527 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	ZNF852	Q6ZMS4	543 aa		11.72	□□□□□ -0.53
CLN6-223	ENST00000637823	MICALCL	Q6ZW33	695 aa		11.72	□□□□□ -0.53

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