RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SCAMP4Q969E2 229 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 HAUS1Q96CS2 278 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 IMP4Q96G21 291 aaKnown RBP13.76□□□□□ -0.21
PNKP-228ENST00000637325 LYSMD1Q96S90 227 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 CCDC3Q9BQI4 270 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 GSDMCQ9BYG8 508 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 DPEP2Q9H4A9 486 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 GLOD4Q9HC38 313 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 PKD2L2Q9NZM6 624 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 RAXQ9Y2V3 346 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 hCG_1818297A0A087WSY0 165 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 GOLGA6L6A8MZA4 724 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 MTSS1O43312 755 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 CEACAM5P06731 702 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 PECAM1P16284 738 aaPredicted RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 PTPN3P26045 913 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 CETN2P41208 172 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 TNNT3P45378 269 aaPredicted RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 POLD2P49005 469 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 MARCKSL1P49006 195 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 CDK18Q07002 472 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 ILF3Q12906 894 aaKnown RBP eCLIP13.75□□□□□ -0.21
PNKP-228ENST00000637325 RTP5Q14D33 572 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 PRKD1Q15139 912 aaPredicted RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 ADAMTSL4Q6UY14 1074 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 RBM44Q6ZP01 1051 aaKnown RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 ZC3H18Q86VM9 953 aaKnown RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 NLRP8Q86W28 1048 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 RAVER1Q8IY67 606 aaKnown RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 TXLNBQ8N3L3 684 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 ACRBPQ8NEB7 543 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 CCL4L1Q8NHW4 92 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 WDR48Q8TAF3 677 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 KIAA1524Q8TCG1 905 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 KRT35Q92764 455 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 CCDC74AQ96AQ1 378 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 HIC2Q96JB3 615 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 RIOK2Q9BVS4 552 aaKnown RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 HEMGNQ9BXL5 484 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 FRMD8Q9BZ67 464 aaPredicted RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 FAM83DQ9H4H8 585 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 KLHL8Q9P2G9 620 aaPredicted RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 IMPACTQ9P2X3 320 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 SUFUQ9UMX1 484 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 TMEM98Q9Y2Y6 226 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 GPSM3Q9Y4H4 160 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 PCDHB1Q9Y5F3 818 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 DUSP10Q9Y6W6 482 aa13.75□□□□□ -0.21
PNKP-228ENST00000637325 DSPP15924 2871 aaKnown RBP13.75□□□□□ -0.21
PNKP-228ENST00000637325 COL27A1Q8IZC6 1860 aaPredicted RBP13.74□□□□□ -0.21
PNKP-228ENST00000637325 RGSL1A5PLK6 1076 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 RCCD1A6NED2 376 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 BTNL10A8MVZ5 291 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 B4DGG1 531 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 H7C0C1 242 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 INPP4BO15327 924 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 ZZEF1O43149 2961 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 USP12O75317 370 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 PMPCBO75439 489 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 TCEA3O75764 348 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 ASMTLO95671 621 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 MT-CYBP00156 380 aaPredicted RBP13.74□□□□□ -0.21
PNKP-228ENST00000637325 IVLP07476 585 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 ATP5OP48047 213 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 SPINT3P49223 89 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 VAV2P52735 878 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 COPS2P61201 443 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 ADCY2Q08462 1091 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 PEX6Q13608 980 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 SPIDRQ14159 915 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 PPP2R5EQ16537 467 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 SPATA22Q8NHS9 363 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 TEKT5Q96M29 485 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 AGAP2Q99490 1192 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 FERMT1Q9BQL6 677 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 ZFYVE1Q9HBF4 777 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 TRNAU1APQ9NX07 287 aaKnown RBP13.74□□□□□ -0.21
PNKP-228ENST00000637325 UBP1Q9NZI7 540 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 SLC17A4Q9Y2C5 497 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 REXO2Q9Y3B8 237 aaKnown RBP13.74□□□□□ -0.21
PNKP-228ENST00000637325 PCDHA3Q9Y5H8 950 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 SCN8AQ9UQD0 1980 aa13.74□□□□□ -0.21
PNKP-228ENST00000637325 MACROD2A1Z1Q3 448 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 CCDC66A2RUB6 948 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 HACD1B0YJ81 288 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 BRINP1O60477 761 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 SOD1P00441 154 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 SLC4A1P02730 911 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 PIRTP0C851 137 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 CTNNA2P26232 953 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 CDC25BP30305 580 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 CTNNA1P35221 906 aaKnown RBP13.73□□□□□ -0.21
PNKP-228ENST00000637325 ACTN2P35609 894 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 KIF5AQ12840 1032 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 BIRC2Q13490 618 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 SLC14A2Q15849 920 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 ISXQ2M1V0 245 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 C14orf28Q4W4Y0 310 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 SLC30A9Q6PML9 568 aa13.73□□□□□ -0.21
PNKP-228ENST00000637325 BBS12Q6ZW61 710 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms