RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 C11orf44Q8N8P7 122 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 POGLUT1Q8NBL1 392 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 OR52M1Q8NGK5 317 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 RP9Q8TA86 221 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ZNF671Q8TAW3 534 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 GANCQ8TET4 914 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 GRAMD1AQ96CP6 724 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 R3HDM4Q96D70 268 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 FBXL20Q96IG2 436 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 NLRP4Q96MN2 994 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PRICKLE1Q96MT3 831 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 MTMR9Q96QG7 549 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 REEP2Q9BRK0 252 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 APOL6Q9BWW8 343 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 OSBPL10Q9BXB5 764 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 FSD1LQ9BXM9 530 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 LSG1Q9H089 658 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ABCG8Q9H221 673 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ST6GALNAC4Q9H4F1 302 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 SEPSECSQ9HD40 501 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 KCNK9Q9NPC2 374 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 SEMA4GQ9NTN9 838 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 HCFC1R1Q9NWW0 138 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 DLL3Q9NYJ7 618 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 SLC17A6Q9P2U8 582 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 LRIT1Q9P2V4 623 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 NKX1-2Q9UD57 310 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 AMACRQ9UHK6 382 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 SUFUQ9UMX1 484 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CNTN6Q9UQ52 1028 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 NAALAD2Q9Y3Q0 740 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 SNX9Q9Y5X1 595 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 FNDC1Q4ZHG4 1894 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 KAT6AQ92794 2004 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 FAM205AQ6ZU69 1335 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 TRAV34A0A0B4J273 112 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 PNMA6EA0A0J9YXQ4 647 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 OR6C74A6NCV1 312 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 URADA6NGE7 173 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 OR6C65A6NJZ3 312 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 FOXO6A8MYZ6 492 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 E7EVH7 732 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 E9PBE3 544 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 FAM86B1E9PN63 330 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 H0YIZ8 118 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 STX16-NPEPL1H3BU86 382 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 M0QZQ0 153 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 IFIT3O14879 490 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 ZSCAN9O15535 394 aaPredicted RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 CIDEAO60543 219 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 TACC1O75410 805 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 RPP40O75818 363 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 C22orf31O95567 290 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 MBPP02686 304 aaPredicted RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 IVLP07476 585 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 ABCB1P08183 1280 aaPredicted RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 INHBAP08476 426 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 FGF4P08620 206 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 MYBL1P10243 752 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 NR2F6P10588 404 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 KRT5P13647 590 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 RXRAP19793 462 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 CTNNA2P26232 953 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 CHMLP26374 656 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 RPA1P27694 616 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 EPHA8P29322 1005 aaPredicted RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 GCH1P30793 250 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 RPL9P32969 192 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 HNF1BP35680 557 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 LONP1P36776 959 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 MDH1P40925 334 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 GARSP41250 739 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 GRIA3P42263 894 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 CAPZA2P47755 286 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 RARRES1P49788 294 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 CLCN4P51793 760 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 RARSP54136 660 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 HUNKP57058 714 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 CARD18P57730 90 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 RPS3AP61247 264 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 B2MP61769 119 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 NOP14P78316 857 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 BASP1P80723 227 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 PSG6Q00889 435 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 FOXF2Q12947 444 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 PLD1Q13393 1074 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 MTX1Q13505 466 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 DNASE1L3Q13609 305 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 DHX34Q14147 1143 aaKnown RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 BTG3Q14201 252 aaPredicted RBP3□□□□□ -1.93
PSPC1-208ENST00000635562 CSHL1Q14406 222 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 SEC23BQ15437 767 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 GPR68Q15743 365 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 ST3GAL2Q16842 350 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 BTBD16Q32M84 506 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 TBC1D25Q3MII6 688 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 FBXO43Q4G163 708 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 TMEM196Q5HYL7 178 aa3□□□□□ -1.93
PSPC1-208ENST00000635562 NHSL2Q5HYW2 709 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms