RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 DEFB115Q30KQ5 88 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CNPY1Q3B7I2 92 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 MAP7D1Q3KQU3 841 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 THEMIS2Q5TEJ8 643 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CLEC6AQ6EIG7 209 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 ZNF549Q6P9A3 640 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 RPS27LQ71UM5 84 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 RTN4RL1Q86UN2 441 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 CIR1Q86X95 450 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 PTGR2Q8N8N7 351 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 TMEM102Q8N9M5 508 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 ATAD1Q8NBU5 361 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 OR52K2Q8NGK3 314 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 OR4L1Q8NH43 312 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 LINC01599Q8WXQ3 324 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 LPGAT1Q92604 370 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 EXT2Q93063 718 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 ZFRQ96KR1 1074 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 CDK5RAP1Q96SZ6 601 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 TCF12Q99081 682 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 MRPS26Q9BYN8 205 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 MAGEH1Q9H213 219 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 PDFQ9HBH1 243 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 SYTL2Q9HCH5 934 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 VCX3AQ9NNX9 186 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 POLR3BQ9NW08 1133 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 CCDC167Q9P0B6 97 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TMEM181Q9P2C4 612 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CD300AQ9UGN4 299 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 SEPT3Q9UH03 358 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CRYL1Q9Y2S2 319 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 MTF2Q9Y483 593 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 ARL5AQ9Y689 179 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 COMMD3-BMI1R4GMX3 469 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 BPTFQ12830 3046 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 ANAPC1Q9H1A4 1944 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TCRBV3S1A0A5B6 114 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 UBXN8O00124 270 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 KERAO60938 352 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 RNASEH2AO75792 299 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 RHOBTB1O94844 696 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CDK14O94921 469 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 ZDHHC11BP0C7U3 371 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 SMIM18P0DKX4 95 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 GPX3P22352 226 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 FGFR3P22607 806 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CES1P23141 567 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CCND3P30281 292 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 GSTT1P30711 240 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 SLC7A1P30825 629 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 RPL5P46777 297 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 KCNC1P48547 511 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 ATXN3P54252 364 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 ATP6V0D1P61421 351 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TIAL1Q01085 375 aaKnown RBP eCLIP8.05□□□□□ -1.123e-7■■□□□ 12
GPC3-204ENST00000631057 RAD51Q06609 339 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TRIM32Q13049 653 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 GPR17Q13304 367 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 GALNT3Q14435 633 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 OR4D1Q15615 310 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 KIF19Q2TAC6 998 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 UGT3A2Q3SY77 523 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 MGAT5BQ3V5L5 792 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 C5orf22Q49AR2 442 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 FAM171A1Q5VUB5 890 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 IL23RQ5VWK5 629 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 KANK2Q63ZY3 851 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 NADSYN1Q6IA69 706 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 C8orf82Q6P1X6 216 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 PAOXQ6QHF9 649 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 AFTPHQ6ULP2 937 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CYHR1Q6ZMK1 362 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 EFL1Q7Z2Z2 1120 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 RNF180Q86T96 592 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 LGI2Q8N0V4 545 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 MIER2Q8N344 545 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 RYBPQ8N488 228 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 TTC9BQ8N6N2 239 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 FAM156AQ8NDB6 213 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 GPR152Q8TDT2 470 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 C2orf15Q8WU43 125 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 ATOH8Q96SQ7 321 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 SEPT5Q99719 369 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 MGME1Q9BQP7 344 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TRIM15Q9C019 465 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 ARHGAP39Q9C0H5 1083 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 DERL2Q9GZP9 239 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CCDC68Q9H2F9 335 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 ZNF696Q9H7X3 374 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 AKTIPQ9H8T0 292 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 MID1IP1Q9NPA3 183 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 NLE1Q9NVX2 485 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 TMEM161AQ9NX61 479 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TMCO1Q9UM00 188 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 PADI4Q9UM07 663 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 VPS9D1Q9Y2B5 631 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 NDUFAF1Q9Y375 327 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 PIKFYVEQ9Y2I7 2098 aa8.04□□□□□ -1.12
GPC3-204ENST00000631057 PCNTO95613 3336 aa8.04□□□□□ -1.12
GPC3-204ENST00000631057 MTMR11A4FU01 709 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms