RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 A0A0J9YYE9 177 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 EIF4E1BA6NMX2 242 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 C9orf172C9J069 976 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 PSMD11O00231 422 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 PRAMEF10O60809 474 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 TRBC1P01850 177 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 HLA-DQB2P05538 268 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 TEAD1P28347 426 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 HNRNPH3P31942 346 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 GJC1P36383 396 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 ADCY8P40145 1251 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 MLLT3P42568 568 aaPredicted RBP13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 UCNP55089 124 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 C19orf57Q0VDD7 668 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 ANKRD20A8PQ5CZ79 823 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 RALGPS1Q5JS13 557 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 BROXQ5VW32 411 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 RAET1GQ6H3X3 334 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 PAF1Q8N7H5 531 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 CNTD1Q8N815 330 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 OR6C4Q8NGE1 309 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZNF564Q8TBZ8 553 aaPredicted RBP13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZDHHC1Q8WTX9 485 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 RAPGEF5Q92565 580 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 EID2BQ96D98 161 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 COX14Q96I36 57 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 TDRD1Q9BXT4 1180 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 PHPT1Q9NRX4 125 aaPredicted RBP13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 TRNAU1APQ9NX07 287 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 PISDQ9UG56 409 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 CHKBQ9Y259 395 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 OAS3Q9Y6K5 1087 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 A0A1W2PQ67 120 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 MYO1FO00160 1098 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 MATN3O15232 486 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 PROSCO94903 275 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 CLDN7O95471 211 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 IVLP07476 585 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 CYP2A6P11509 494 aaPredicted RBP13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 CCL4P13236 92 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 PLA2G2AP14555 144 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 CD1CP29017 333 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 CSF2RBP32927 897 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 SERPINB6P35237 376 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 STC1P52823 247 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 RHDQ02161 417 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 EIF3IQ13347 325 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 KRT81Q14533 505 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 DOK6Q6PKX4 331 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 SLC30A9Q6PML9 568 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 ADAMTSL4Q6UY14 1074 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 USP53Q70EK8 1073 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZFAND4Q86XD8 727 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 RCBTB1Q8NDN9 531 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 TMEM74Q96NL1 305 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 TSGA13Q96PP4 275 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 XPO4Q9C0E2 1151 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 POLR1EQ9GZS1 481 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 DTLQ9NZJ0 730 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 TMEM9Q9P0T7 183 aa13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 LUC7L2Q9Y383 392 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 ASH1LQ9NR48 2969 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-241ENST00000626948 IGHV5-10-1A0A0J9YXX1 117 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 CAPN8A6NHC0 703 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 C3orf70A6NLC5 250 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 FADS2P1A8MWK0 482 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 NVLO15381 856 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 CCNCP24863 283 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZBTB17Q13105 803 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZSCAN23Q3MJ62 389 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 LINC00303Q3SY05 128 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 PYCR3Q53H96 274 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 NKAIN2Q5VXU1 208 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 USP45Q70EL2 814 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 DTX1Q86Y01 620 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 PLD5Q8N7P1 536 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 EXD3Q8N9H8 876 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 FATE1Q969F0 183 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 AP2M1Q96CW1 435 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 WBP1Q96G27 269 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZNF670Q9BS34 389 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 RIOK2Q9BVS4 552 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 BRD8Q9H0E9 1235 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 RBM22Q9NW64 420 aaKnown RBP eCLIP13.46□□□□□ -0.251e-38■■■■■ 43.7
SOX2-OT-241ENST00000626948 PRKAB1Q9Y478 270 aa13.46□□□□□ -0.25
SOX2-OT-241ENST00000626948 GOLGA6CA6NDK9 693 aa13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 GOLGA6BA6NDN3 693 aa13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 PDE2AO00408 941 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 DNAJC6O75061 913 aa13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 ATP1A1P05023 1023 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 GOLGA6DP0CG33 693 aa13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 KDELR1P24390 212 aa13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 SSR1P43307 286 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 GPR1P46091 355 aa13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 ITKQ08881 620 aa13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 ILF3Q12906 894 aaKnown RBP eCLIP13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 ARHGEF7Q14155 803 aa13.45□□□□□ -0.26
SOX2-OT-241ENST00000626948 IFI16Q16666 785 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms