RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 F7P08709 466 aaPredicted RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 IL7RP16871 459 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 AMD1P17707 334 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 PIP4K2AP48426 406 aaPredicted RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 HNRNPH2P55795 449 aaKnown RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 DLX5P56178 289 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 SLC20A2Q08357 652 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 G3BP1Q13283 466 aaKnown RBP eCLIP3.29□□□□□ -1.88
VBP1-204ENST00000625964 KRT24Q2M2I5 525 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 PLEKHA7Q6IQ23 1121 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 TSSK4Q6SA08 328 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 CHERPQ8IWX8 916 aaKnown RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 NAXEQ8NCW5 288 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 IL17REQ8NFR9 667 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 MAGEC3Q8TD91 643 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 PSPC1Q8WXF1 523 aaKnown RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 CD101Q93033 1021 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 SMARCE1Q969G3 411 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 CMKLR1Q99788 373 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 SPRY4Q9C004 299 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 PDCL3Q9H2J4 239 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 EVA1AQ9H8M9 152 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 EBF2Q9HAK2 575 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 SLC28A3Q9HAS3 691 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 MMP25Q9NPA2 562 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 TCF7L2Q9NQB0 619 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 MCM9Q9NXL9 1143 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 AMDHD2Q9Y303 409 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 LOXL2Q9Y4K0 774 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 KIF26BQ2KJY2 2108 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 NPIPB15A6NHN6 443 aaPredicted RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 ZNF587BE7ETH6 402 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 KRT36O76013 467 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 EGFP01133 1207 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 SPARCP09486 303 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 ICAM3P32942 547 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 KRT9P35527 623 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 VEGFCP49767 419 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 CCR9P51686 369 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 RELQ04864 619 aaPredicted RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 ACSM2AQ08AH3 577 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 DCTN2Q13561 401 aaKnown RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 FRG1Q14331 258 aaKnown RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 CCDC6Q16204 474 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 KCNT1Q5JUK3 1230 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 GPATCH4Q5T3I0 446 aaKnown RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 INTS11Q5TA45 600 aaKnown RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 IRAK1BP1Q5VVH5 260 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 JAKMIP3Q5VZ66 844 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 SIGIRRQ6IA17 410 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 DUS1LQ6P1R4 473 aaKnown RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 SATL1Q86VE3 508 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 MAB21L3Q8N8X9 362 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 PCYOX1LQ8NBM8 494 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 DUSP19Q8WTR2 217 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 ORAI1Q96D31 301 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 FEM1CQ96JP0 617 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 PPM1MQ96MI6 270 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 INPP4AQ96PE3 977 aaPredicted RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 EPYCQ99645 322 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 PCGF1Q9BSM1 259 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 C1QTNF5Q9BXJ0 243 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 SLC26A6Q9BXS9 759 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 RANBP17Q9H2T7 1088 aaKnown RBP3.29□□□□□ -1.88
VBP1-204ENST00000625964 PCDH9Q9HC56 1237 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 TMEM98Q9Y2Y6 226 aa3.29□□□□□ -1.88
VBP1-204ENST00000625964 COL2A1P02458 1487 aaPredicted RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 GOLGA6L9A6NEM1 432 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 TGFB1I1O43294 461 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 NKX2-2O95096 273 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 ZNF182P17025 639 aaPredicted RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 KCNA5P22460 613 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 MCM3P25205 808 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 ELF1P32519 619 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 GNL1P36915 607 aaPredicted RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 IL15P40933 162 aaPredicted RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 ZNF132P52740 706 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 RPL7AP62424 266 aaKnown RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 CSNK2A1P68400 391 aaPredicted RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 OLR1P78380 273 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 TROAPQ12815 778 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 TMEM115Q12893 351 aaPredicted RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 ILF3Q12906 894 aaKnown RBP eCLIP3.28□□□□□ -1.88
VBP1-204ENST00000625964 OLIG2Q13516 323 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 ZRSR1Q15695 479 aaKnown RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 DPCR1Q3MIW9 517 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 CXorf66Q5JRM2 361 aaPredicted RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 C9orf139Q6ZV77 190 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 SLC9B2Q86UD5 537 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 DIS3L2Q8IYB7 885 aaKnown RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 ZNF34Q8IZ26 560 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 PCDH20Q8N6Y1 951 aaKnown RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 CSNK2A3Q8NEV1 391 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 BBS10Q8TAM1 723 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 KCNG4Q8TDN1 519 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 SLC20A1Q8WUM9 679 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 INTS12Q96CB8 462 aaKnown RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 GRAMD2BQ96HH9 432 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 HARBI1Q96MB7 349 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 MTERF1Q99551 399 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms