RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 CMAHPQ9Y471 501 aa4.15□□□□□ -1.75
CDR1-202ENST00000625883 IGHV4-28A0A0C4DH34 117 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 A8MV72 311 aaPredicted RBP4.14□□□□□ -1.75
CDR1-202ENST00000625883 H3BQ06 376 aaPredicted RBP4.14□□□□□ -1.75
CDR1-202ENST00000625883 VWA5AO00534 786 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 SH2B2O14492 632 aaPredicted RBP4.14□□□□□ -1.75
CDR1-202ENST00000625883 ZIC3O60481 467 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 DAB1O75553 588 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 DNTTP04053 509 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 ANXA7P20073 488 aaKnown RBP4.14□□□□□ -1.75
CDR1-202ENST00000625883 NR4A2P43354 598 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 MXI1P50539 228 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 HSD17B4P51659 736 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 NUDT6P53370 316 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 ABATP80404 500 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 TWIST1Q15672 202 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 FSCBQ5H9T9 825 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 GGNBP1Q5YKI7 109 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 METTL2BQ6P1Q9 378 aaKnown RBP4.14□□□□□ -1.75
CDR1-202ENST00000625883 TMCO3Q6UWJ1 677 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 C1QL2Q7Z5L3 287 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 HACE1Q8IYU2 909 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 TRPC4APQ8TEL6 797 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 JAKMIP2Q96AA8 810 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 CCDC34Q96HJ3 373 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 METTL2AQ96IZ6 378 aaKnown RBP4.14□□□□□ -1.75
CDR1-202ENST00000625883 HARBI1Q96MB7 349 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 GAD1Q99259 594 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 C1QTNF7Q9BXJ2 289 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 TEX12Q9BXU0 123 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 PIGMQ9H3S5 423 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 EBF3Q9H4W6 596 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 ACSS1Q9NUB1 689 aaPredicted RBP4.14□□□□□ -1.75
CDR1-202ENST00000625883 TINAGQ9UJW2 476 aa4.14□□□□□ -1.75
CDR1-202ENST00000625883 PTRH2Q9Y3E5 179 aaKnown RBP4.14□□□□□ -1.75
CDR1-202ENST00000625883 OGG1O15527 345 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 MITFO75030 526 aaPredicted RBP4.13□□□□□ -1.75
CDR1-202ENST00000625883 ICAM1P05362 532 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 DDX5P17844 614 aaKnown RBP4.13□□□□□ -1.75
CDR1-202ENST00000625883 HOXC9P31274 260 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 RAD23BP54727 409 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 MRPS5P82675 430 aaKnown RBP4.13□□□□□ -1.75
CDR1-202ENST00000625883 ROR2Q01974 943 aaKnown RBP4.13□□□□□ -1.75
CDR1-202ENST00000625883 NTRK2Q16620 822 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 PPP6R3Q5H9R7 873 aaPredicted RBP4.13□□□□□ -1.75
CDR1-202ENST00000625883 SIGIRRQ6IA17 410 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 PRPF39Q86UA1 669 aaKnown RBP4.13□□□□□ -1.75
CDR1-202ENST00000625883 AACSQ86V21 672 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 PIM3Q86V86 326 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 KBTBD6Q86V97 674 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 OR8K5Q8NH50 307 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 LRFN5Q96NI6 719 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 FIZ1Q96SL8 496 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 RBM38Q9H0Z9 239 aaKnown RBP4.13□□□□□ -1.75
CDR1-202ENST00000625883 HRH4Q9H3N8 390 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 SEBOXQ9HB31 216 aaPredicted RBP4.13□□□□□ -1.75
CDR1-202ENST00000625883 CNGB3Q9NQW8 809 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 COPG2Q9UBF2 871 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 FBXW11Q9UKB1 542 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 FZD10Q9ULW2 581 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 PTGDR2Q9Y5Y4 395 aa4.13□□□□□ -1.75
CDR1-202ENST00000625883 SYNDIG1LA6NDD5 238 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 B4DGG1 531 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 ASAP2O43150 1006 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 NDUFS7O75251 213 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 ACTN1P12814 892 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 UBA1P22314 1058 aaKnown RBP4.12□□□□□ -1.75
CDR1-202ENST00000625883 RPL3P39023 403 aaKnown RBP4.12□□□□□ -1.75
CDR1-202ENST00000625883 PRCPP42785 496 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 SUOXP51687 545 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 GPR143P51810 404 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 PNLIPRP2P54317 469 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 SPOCK1Q08629 439 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 Q0VFX4 171 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 LRMPQ12912 555 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 PNLIPRP3Q17RR3 467 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 ZNF805Q5CZA5 627 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 BMP2KLQ5H9B9 411 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 RARS2Q5T160 578 aaKnown RBP4.12□□□□□ -1.75
CDR1-202ENST00000625883 ZNF425Q6IV72 752 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 ZNF280DQ6N043 979 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 TAOK1Q7L7X3 1001 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 CACNA2D4Q7Z3S7 1137 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 TECPR1Q7Z6L1 1165 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 SDCCAG8Q86SQ7 713 aaPredicted RBP4.12□□□□□ -1.75
CDR1-202ENST00000625883 ZC3HC1Q86WB0 502 aaKnown RBP4.12□□□□□ -1.75
CDR1-202ENST00000625883 PRR26Q8N8Z3 221 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 PRPF31Q8WWY3 499 aaKnown RBP4.12□□□□□ -1.75
CDR1-202ENST00000625883 OIT3Q8WWZ8 545 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 ADAMTS14Q8WXS8 1223 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 RND1Q92730 232 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 LRRC59Q96AG4 307 aaKnown RBP4.12□□□□□ -1.75
CDR1-202ENST00000625883 RHBDF1Q96CC6 855 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 GRAMD2BQ96HH9 432 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 ABHD1Q96SE0 405 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 PAFAH2Q99487 392 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 SH3GL2Q99962 352 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 C1QTNF1Q9BXJ1 281 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 TXLNGYQ9BZA5 131 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 FAM234AQ9H0X4 552 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms