RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 UGT2B28Q9BY64 529 aa6.29□□□□□ -1.4
CDKL5-205ENST00000623535 EHD4Q9H223 541 aa6.29□□□□□ -1.4
CDKL5-205ENST00000623535 PTPRZ1P23471 2315 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-205ENST00000623535 ILVBLA1L0T0 632 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 KLRC4-KLRK1H3BQV0 150 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 SCRN1Q12765 414 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 SIM2Q14190 667 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 INO80DQ53TQ3 878 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 XKR6Q5GH73 641 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 TMC5Q6UXY8 1006 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 NAXEQ8NCW5 288 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 FCRL2Q96LA5 508 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 FAM83CQ9BQN1 747 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 EPB41L1Q9H4G0 881 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ABCB10Q9NRK6 738 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 MAU2Q9Y6X3 613 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 SAGP10523 405 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 C9orf64Q5T6V5 341 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 GPAT4Q86UL3 456 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 LRRC8AQ8IWT6 810 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 KAT2BQ92831 832 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 SLC5A5Q92911 643 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 EXOC2Q96KP1 924 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 YIPF4Q9BSR8 244 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 DCUN1D5Q9BTE7 237 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 NOL6Q9H6R4 1146 aaKnown RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 PNPLA7Q6ZV29 1317 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ARPC2O15144 300 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CLDN11O75508 207 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 OXSR1O95747 527 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CYP11B2P19099 503 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 HYIQ5T013 277 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 DESI2Q9BSY9 194 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CYP4F12Q9HCS2 524 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 COL1A2P08123 1366 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 RIMS1Q86UR5 1692 aaKnown RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 C2orf71A6NGG8 1288 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 RENP00797 406 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 DSC3Q14574 896 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 FUT11Q495W5 492 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 PIK3R6Q5UE93 754 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 TPGS2Q68CL5 300 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF572Q7Z3I7 529 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CMTR2Q8IYT2 770 aaKnown RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 OR2L3Q8NG85 312 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CSPG4P5Q96PW8 444 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 TAAR1Q96RJ0 339 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 DUSP23Q9BVJ7 150 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 DDX18Q9NVP1 670 aaKnown RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 PHF24Q9UPV7 400 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ZBTB22O15209 634 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 AGTP01019 485 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 HSMCR30P0CW71 290 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF23P17027 643 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 HNF4AP41235 474 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 GMFBP60983 142 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 PTPN11Q06124 597 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 DBPQ10586 325 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 MALLQ13021 153 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ALX1Q15699 326 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 SWI5Q1ZZU3 235 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 TRPM4Q8TD43 1214 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 FAM84BQ96KN1 310 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 IER2Q9BTL4 223 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 DCTN4Q9UJW0 460 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CEMIPQ8WUJ3 1361 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 LOC102723532A0A0G2JNH3 316 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 SCDO00767 359 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 SNPHO15079 494 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 HSPA12AO43301 675 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ATG7O95352 703 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 EOMESO95936 686 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 EPS8Q12929 822 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 TRAF2Q12933 501 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ITGB3BPQ13352 177 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 POMZP3Q6PJE2 187 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 FAM92BQ6ZTR7 304 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 PTCD2Q8WV60 388 aaKnown RBP6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CHP1Q99653 195 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 FBRSQ9HAH7 460 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CD207Q9UJ71 328 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 LAMP2P13473 410 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ITPRIPL2Q3MIP1 535 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CCDC103Q8IW40 242 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 FAM46DQ8NEK8 389 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 PPP1R35Q8TAP8 253 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 TMEM138Q9NPI0 162 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 NUDT5Q9UKK9 219 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ADAM28Q9UKQ2 775 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 MEMO1Q9Y316 297 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 PNMA8CA0A1B0GUJ8 204 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 HACD1B0YJ81 288 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 E7ENX8 843 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 NPC1O15118 1278 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 YKT6O15498 198 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ELNP15502 786 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 CYP11B1P15538 503 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF20P17024 532 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 TAP2Q03519 686 aa6.28□□□□□ -1.4
CDKL5-205ENST00000623535 GRIK5Q16478 980 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms