RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MARK2Q7KZI7 788 aaKnown RBP17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 CBARPQ8N350 705 aaPredicted RBP17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 GABPB2Q8TAK5 448 aaPredicted RBP17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 EDAQ92838 391 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 HHIPQ96QV1 700 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 PPCSQ9HAB8 311 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 UGT1A7Q9HAW7 530 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 UGT1A10Q9HAW8 530 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 UGT1A8Q9HAW9 530 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 CATSPERZQ9NTU4 200 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 FETUBQ9UGM5 382 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 SLC24A2Q9UI40 661 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 PLXNA2O75051 1894 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 PSMD11O00231 422 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 TSPAN6O43657 245 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 MMP20O60882 483 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 PCDH8O95206 1070 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 DCNP07585 359 aaKnown RBP17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 INHBAP08476 426 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 GCAP28676 217 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 ETV3P41162 512 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 PEX6Q13608 980 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 ZDHHC20Q5W0Z9 365 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 ANO7Q6IWH7 933 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 USP30Q70CQ3 517 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 FAM124AQ86V42 546 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 KBTBD6Q86V97 674 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 SPEM1Q8N4L4 309 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 GPR26Q8NDV2 337 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 OR14C36Q8NHC7 312 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 SLC44A1Q8WWI5 657 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 IL26Q9NPH9 171 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 TXNDC16Q9P2K2 825 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 CD84Q9UIB8 345 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 FZD4Q9ULV1 537 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 PSAT1Q9Y617 370 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 SLC30A1Q9Y6M5 507 aa17.76■□□□□ 0.43
PTCHD3-202ENST00000622555 GLYATL1P3A0A0U1RQE8 302 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 GOLGA6L10A6NI86 522 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 CD3EAPO15446 510 aaKnown RBP17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 DCXO43602 365 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 OPA1O60313 960 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 FAM155BO75949 473 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 F7P08709 466 aaPredicted RBP17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 C6P13671 934 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 SLC1A2P43004 574 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 XIAPP98170 497 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 CTBP1Q13363 440 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 FASTKD1Q53R41 847 aaKnown RBP17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 ZRANB3Q5FWF4 1079 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 Q6ZVL8 140 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 CROCCP2Q86T23 111 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 SLC26A11Q86WA9 606 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 DENND6AQ8IWF6 608 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 CNTN4Q8IWV2 1026 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 DCAKDQ8WVC6 231 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 FAM131CQ96AQ9 280 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 DHRS4Q9BTZ2 278 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 CENPHQ9H3R5 247 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 RAD18Q9NS91 495 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 NSMCE4AQ9NXX6 385 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 MARCH4Q9P2E8 410 aaPredicted RBP17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 PSMC3IPQ9P2W1 217 aaPredicted RBP17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 CTNNAL1Q9UBT7 734 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 APPL1Q9UKG1 709 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 COQ6Q9Y2Z9 468 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 PLRG1O43660 514 aaKnown RBP17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 LZTS3O60299 673 aaPredicted RBP17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 CDH16O75309 829 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 SRP72O76094 671 aaKnown RBP17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 PRAMEF1O95521 474 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 PDGFBP01127 241 aaPredicted RBP17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 MYZAPP0CAP1 466 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 FOXN2P32314 431 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 TPMTP51580 245 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 PTPN5P54829 565 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 GYS2P54840 703 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 MTAPQ13126 283 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 MRNIPQ6NTE8 343 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 STRA8Q7Z7C7 330 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 LMNTD2Q8IXW0 634 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 SGSM3Q96HU1 749 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 COQ10AQ96MF6 247 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 PLEKHG4BQ96PX9 1271 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 CPNE1Q99829 537 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 FAM96AQ9H5X1 160 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 CD93Q9NPY3 652 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 TBK1Q9UHD2 729 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 FBXO5Q9UKT4 447 aa17.75■□□□□ 0.43
PTCHD3-202ENST00000622555 DOCK9Q9BZ29 2069 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 TECTAO75443 2155 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 RGSL1A5PLK6 1076 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 PRR23AA6NEV1 266 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 GAPDHSO14556 408 aaPredicted RBP17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 WNT9AO14904 365 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 PRSS56P0CW18 603 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 ITGALP20701 1170 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 ADPRHP54922 357 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 MPP1Q00013 466 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms