RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 EXOC1LA0A1B0GW35 172 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 GOLGA8KD6RF30 607 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 POC1B-GALNT4F8VUJ3 575 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 GOLGA8TH3BQL2 631 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CCL22O00626 93 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 RASGRF2O14827 1237 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 WNT9AO14904 365 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 PLRG1O43660 514 aaKnown RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 PI15O43692 258 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 LZTS3O60299 673 aaPredicted RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 MMP20O60882 483 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 SASH3O75995 380 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 GOT2P00505 430 aaKnown RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 IGLV3-19P01714 112 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 SLC4A1P02730 911 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 DCNP07585 359 aaKnown RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 ELFN1P0C7U0 828 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 MC4RP32245 332 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 SPAM1P38567 509 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 MSH2P43246 934 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CXCL12P48061 93 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 TPMTP51580 245 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CLCN5P51795 746 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 IFFO1Q0D2I5 559 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 MTAPQ13126 283 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 NAB1Q13506 487 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 PEX6Q13608 980 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 ACOX1Q15067 660 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 RASA2Q15283 850 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 NEK5Q6P3R8 708 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 KIAA1324Q6UXG2 1013 aaKnown RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 RFLNAQ6ZTI6 216 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 Q6ZVL8 140 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CYP2U1Q7Z449 544 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 PTAR1Q7Z6K3 402 aaPredicted RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 SDCCAG8Q86SQ7 713 aaPredicted RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 CROCCP2Q86T23 111 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 KCNMB4Q86W47 210 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 LRRC6Q86X45 466 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CACUL1Q86Y37 369 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 TDRPQ86YL5 185 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CNTN4Q8IWV2 1026 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CTAGE3PQ8IX95 158 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 LMNTD2Q8IXW0 634 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 PGBD3Q8N328 593 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CAMKK1Q8N5S9 505 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 PPM1NQ8N819 430 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 GPR26Q8NDV2 337 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 TSTD1Q8NFU3 115 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 OR4L1Q8NH43 312 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 OR14C36Q8NHC7 312 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 GABPB2Q8TAK5 448 aaPredicted RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 ZNF398Q8TD17 642 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CALML6Q8TD86 181 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 CXorf40AQ8TE69 158 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 HMGB4Q8WW32 186 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 SLC44A1Q8WWI5 657 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 SCG3Q8WXD2 468 aaKnown RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 CDKL2Q92772 493 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 COQ10AQ96MF6 247 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 AGAP2Q99490 1192 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 WRAP53Q9BUR4 548 aaKnown RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 CDH19Q9H159 772 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 ABCG8Q9H221 673 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 KDM4CQ9H3R0 1056 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 FAM83DQ9H4H8 585 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 PPCSQ9HAB8 311 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 IARS2Q9NSE4 1012 aaKnown RBP8□□□□□ -1.13
CPNE3-209ENST00000620393 KCTD5Q9NXV2 234 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 PKD2L2Q9NZM6 624 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 IL1RAPL1Q9NZN1 696 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 DLGAP2Q9P1A6 1054 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 SLC24A2Q9UI40 661 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 FKBPLQ9UIM3 349 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 GGT7Q9UJ14 662 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 ITM2BQ9Y287 266 aa8□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3DA0A087WVF3 549 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3IA0A087WXS9 549 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3EA0A087X179 549 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3KA0A087X1G2 549 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 GLYATL1P3A0A0U1RQE8 302 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TLDC2A0PJX2 215 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3FA6NER0 549 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TMEM221A6NGB7 291 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 IGLON5A6NGN9 336 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 OR51F1A6NGY5 319 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3LB9A6J9 549 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 M0R296 226 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 AGPSO00116 658 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 GAPDHSO14556 408 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 CD3EAPO15446 510 aaKnown RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ZNF217O75362 1048 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 PIAS1O75925 651 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TM7SF2O76062 418 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 SRP72O76094 671 aaKnown RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 RECQL5O94762 991 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 PCDH8O95206 1070 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 APBB3O95704 486 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 PDGFBP01127 241 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 AHSGP02765 367 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms