RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ELAC1Q9H777 363 aaKnown RBP15□□□□□ -0.01
COL5A1-208ENST00000618395 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 FADS2P1A8MWK0 482 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 ERN1O75460 977 aaKnown RBP15□□□□□ -0.01
COL5A1-208ENST00000618395 HOXB8P17481 243 aaPredicted RBP15□□□□□ -0.01
COL5A1-208ENST00000618395 TMEM214Q6NUQ4 689 aaKnown RBP15□□□□□ -0.01
COL5A1-208ENST00000618395 COMMD7Q86VX2 200 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 TOMM5Q8N4H5 51 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 FEM1AQ9BSK4 669 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 FUCA2Q9BTY2 467 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 CHRAC1Q9NRG0 131 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 FAM149AA5PLN7 773 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 CEP97Q8IW35 865 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 YTHDF1Q9BYJ9 559 aaKnown RBP15□□□□□ -0.01
COL5A1-208ENST00000618395 TAS2R9Q9NYW1 312 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 ABT1Q9ULW3 272 aaKnown RBP15□□□□□ -0.01
COL5A1-208ENST00000618395 BTN3A1O00481 513 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 SCAMP1O15126 338 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 PHKG2P15735 406 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 UBA3Q8TBC4 463 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 SCGB3A2Q96PL1 93 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 NECTIN3Q9NQS3 549 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 NEDD8-MDP1E9PL57 170 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 SLC22A3O75751 556 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 CCNYL3P0C7X3 344 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 ANXA3P12429 323 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 EPORP19235 508 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 CYP2F1P24903 491 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 PRDX6P30041 224 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 CRTC2Q53ET0 693 aaPredicted RBP15□□□□□ -0.01
COL5A1-208ENST00000618395 DPPA2Q7Z7J5 298 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 NMUR2Q9GZQ4 415 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 CFAP97Q9P2B7 532 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 FARS2O95363 451 aaKnown RBP15□□□□□ -0.01
COL5A1-208ENST00000618395 VAMP2P63027 116 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 SLC4A11Q8NBS3 891 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 JPH1Q9HDC5 661 aaPredicted RBP15□□□□□ -0.01
COL5A1-208ENST00000618395 MALT1Q9UDY8 824 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 M0QYT0 321 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 PITPNM1O00562 1244 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 GRIA1P42261 906 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 COPZ2Q9P299 210 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 PCDHGC3Q9UN70 934 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 A8MV72 311 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 GMFGO60234 142 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 FAM86B2P0C5J1 330 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 BMT2Q1RMZ1 405 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 HPDLQ96IR7 371 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 OR52E6Q96RD3 313 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ATP6AP2A0A1C7CYW4 349 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 CPB1P15086 417 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 EPCAMP16422 314 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 GABRB2P47870 512 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ETV1P50549 477 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 PTPRNQ16849 979 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ATCAYQ86WG3 371 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 MAELQ96JY0 434 aaKnown RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 TRAF6Q9Y4K3 522 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 SLC16A9Q7RTY1 509 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 SDR16C5Q8N3Y7 309 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 CHST4Q8NCG5 386 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 PCDHA10Q9Y5I2 948 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 AP2A1O95782 977 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ERVK-10P10266 1014 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 HGFP14210 728 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 PPIBP23284 216 aaKnown RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 NFIAQ12857 509 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 RAPSNQ13702 412 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ALG11Q2TAA5 492 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ZCCHC12Q6PEW1 402 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 FRRS1Q6ZNA5 592 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 CHST15Q7LFX5 561 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 RRNAD1Q96FB5 475 aaKnown RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 MAGEB10Q96LZ2 347 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 COQ10BQ9H8M1 238 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 TMEM184CQ9NVA4 438 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 DNPEPQ9ULA0 475 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 TLL2Q9Y6L7 1015 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ASMTP46597 345 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 LUMP51884 338 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 TDGQ13569 410 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 CDKAL1Q5VV42 579 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 MTFR2Q6P444 385 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ECHDC2Q86YB7 292 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 STAG3L4Q8TBR4 150 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 OR5B12Q96R08 314 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 PPA2Q9H2U2 334 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 TMEM45AQ9NWC5 275 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ANKDD1BA6NHY2 528 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 RFXANKO14593 260 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 PDCD5O14737 125 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 TSHRP16473 764 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 SLC13A2Q13183 592 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 CNTD1Q8N815 330 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 MTFMTQ96DP5 389 aaKnown RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 EIF5A2Q9GZV4 153 aaKnown RBP14.99□□□□□ -0.01
COL5A1-208ENST00000618395 OGTO15294 1046 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 RFPL1O75677 317 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 CBWD3Q5JTY5 395 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms