RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ERCC6LQ2NKX8 1250 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 KCTD16Q68DU8 428 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 PIM3Q86V86 326 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 RASGEF1CQ8N431 466 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 SPATA4Q8NEY3 305 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 COG1Q8WTW3 980 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 CFAP57Q96MR6 1250 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 TMEM59LQ9UK28 342 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 DRGXA6NNA5 263 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 ZNF185O15231 689 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 DUX1O43812 170 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 ITIH2P19823 946 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 PSMA2P25787 234 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 B4GALNT1Q00973 533 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 NFATC4Q14934 902 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 C14orf28Q4W4Y0 310 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 FHL5Q5TD97 284 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 LRRC38Q5VT99 294 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 OGFOD3Q6PK18 319 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 MTERF4Q7Z6M4 381 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 MMGT1Q8N4V1 131 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 NIPA2Q8N8Q9 360 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 FAM46DQ8NEK8 389 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 VOPP1Q96AW1 172 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 RBM41Q96IZ5 413 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 SLC45A3Q96JT2 553 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 RBM15Q96T37 977 aaKnown RBP eCLIP17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 WRAP53Q9BUR4 548 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 ATP13A1Q9HD20 1204 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 STAP1Q9ULZ2 295 aa17.64■□□□□ 0.41
TRAPPC3-209ENST00000616395 ILVBLA1L0T0 632 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 KRIT1O00522 736 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 DDX3YO15523 660 aaKnown RBP17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 B4GAT1O43505 415 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 CPNE6O95741 557 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 CD160O95971 181 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 UGT2B4P06133 528 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 RNF224P0DH78 156 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 NR1D1P20393 614 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 HTR1BP28222 390 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 ATP11AP98196 1134 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 DEUP1Q05D60 604 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 CDC20Q12834 499 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 HLTFQ14527 1009 aaKnown RBP eCLIP17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 CDO1Q16878 200 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 C15orf59Q2T9L4 293 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 AMZ1Q400G9 498 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 C8orf74Q6P047 294 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 TTC7BQ86TV6 843 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 CXorf40AQ8TE69 158 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 SSC4DQ8WTU2 575 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 APOBEC4Q8WW27 367 aaKnown RBP17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 PDXPQ96GD0 296 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 KLHL32Q96NJ5 620 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 NUDT22Q9BRQ3 303 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 TKTL2Q9H0I9 626 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 GOLPH3Q9H4A6 298 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 HOMER3Q9NSC5 361 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 KLQ9UEF7 1012 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 TP53TG5Q9Y2B4 290 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 OR1A2Q9Y585 309 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 B3GALT1Q9Y5Z6 326 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 UNC13CQ8NB66 2214 aa17.63■□□□□ 0.41
TRAPPC3-209ENST00000616395 A1L4Q6 167 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 B4DGG1 531 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 HGSO14964 777 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 NUDT21O43809 227 aaKnown RBP17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 RAD1O60671 282 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 TNFP01375 233 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 GPD1P21695 349 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 GNLYP22749 145 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 LRRC14Q15048 493 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 WSCD2Q2TBF2 565 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 DEFB109BQ30KR1 87 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 SLC25A52Q3SY17 297 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 ZNF787Q6DD87 383 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 CAPRIN2Q6IMN6 1127 aaKnown RBP17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 LRRC31Q6UY01 552 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 MAATS1Q7Z4T9 603 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 TAF8Q7Z7C8 310 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 FAM131BQ86XD5 332 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 PLPP6Q8IY26 295 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 ART4Q93070 314 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 NT5C3BQ969T7 300 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 ARHGEF38Q9NXL2 777 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 V9GYY5 206 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 LRBAP50851 2863 aa17.62■□□□□ 0.41
TRAPPC3-209ENST00000616395 IGHV5-10-1A0A0J9YXX1 117 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 K7EM74 188 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 CAPN5O15484 640 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 KRT38O76015 456 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 ZRANB2O95218 330 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 FGGP02679 453 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 OAS2P29728 719 aaKnown RBP17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 CXCR3P49682 368 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 OR1D5P58170 312 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 COPS2P61201 443 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 INPP5AQ14642 412 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 PPP1R15BQ5SWA1 713 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms