RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 FIZ1Q96SL8 496 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 RETREG1Q9H6L5 497 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CAAP1Q9H8G2 361 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CD84Q9UIB8 345 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 FKBPLQ9UIM3 349 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 PTGESO14684 152 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 FFAR3O14843 346 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 TEX28O15482 410 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 GPR42O15529 346 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 TPST1O60507 370 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 GOT2P00505 430 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ALPPL2P10696 532 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ATP6V1C1P21283 382 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 NSG1P42857 185 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ALDH6A1Q02252 535 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF776Q68DI1 518 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 KIAA0930Q6ICG6 404 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 RIPOR1Q6ZS17 1223 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CMC1Q7Z7K0 106 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 P3H2Q8IVL5 708 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CDYL2Q8N8U2 506 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 AIF1LQ9BQI0 150 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 TRIT1Q9H3H1 467 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC24A3Q9HC58 644 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CDV3Q9UKY7 258 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF711Q9Y462 761 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 THSD7AQ9UPZ6 1657 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 HAS3O00219 553 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 GABRDO14764 452 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 AZIN1O14977 448 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 EPN2O95208 641 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ALBP02768 609 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CTSAP10619 480 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 HGFP14210 728 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 RXRGP48443 463 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF132P52740 706 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 RING1Q06587 406 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF33AQ06730 810 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 TBL3Q12788 808 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNHIT3Q15649 155 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CYP1B1Q16678 543 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF621Q6ZSS3 439 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 LPCAT2Q7L5N7 544 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 TRABD2AQ86V40 505 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 GPR135Q8IZ08 494 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 PHOSPHO2Q8TCD6 241 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 HMGB4Q8WW32 186 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 GPR21Q99679 349 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 TMEM216Q9P0N5 145 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 SORCS3Q9UPU3 1222 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 MRPS33Q9Y291 106 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 WNT9AO14904 365 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 SEC24DO94855 1032 aaPredicted RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 IFNA16P05015 189 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CSTF3Q12996 717 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 RAB33AQ14088 237 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 LRRC36Q1X8D7 754 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 PLEKHG4Q58EX7 1191 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CAPRIN2Q6IMN6 1127 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 TMPRSS6Q8IU80 811 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CLYBLQ8N0X4 340 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 OR10T2Q8NGX3 314 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 LMO3Q8TAP4 145 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC35B2Q8TB61 432 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 DIS3LQ8TF46 1054 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 MFSD3Q96ES6 412 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 NSMCE2Q96MF7 247 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 OLFM3Q96PB7 478 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 TMEM209Q96SK2 561 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 IL12RB2Q99665 862 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CDH19Q9H159 772 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 ABCG8Q9H221 673 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CAB39LQ9H9S4 337 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 DNAJC11Q9NVH1 559 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF180Q9UJW8 692 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 NPEPPSL1A6NEC2 478 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 MAP2K7O14733 419 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CYP7B1O75881 506 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CYP11A1P05108 521 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 HSPA13P48723 471 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 LIMK2P53671 638 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 PAFAH1B3Q15102 231 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 PDK4Q16654 411 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 GPR33Q49SQ1 333 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 ARSIQ5FYB1 569 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 LY6G5CQ5SRR4 150 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 ANKRD22Q5VYY1 191 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 ESRP1Q6NXG1 681 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 BHLHB9Q6PI77 547 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 DEFB107AQ8IZN7 70 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 NUS1Q96E22 293 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 PRICKLE1Q96MT3 831 aaPredicted RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 TMEM237Q96Q45 408 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 INTS10Q9NVR2 710 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 TMEM248Q9NWD8 314 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 IMPAD1Q9NX62 359 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 SCN3BQ9NY72 215 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CCDC167Q9P0B6 97 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms