RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 C21orf62-AS1Q17RA5 79 aa8.82□□□□□ -1
VPS11-206ENST00000614944 MMEL1Q495T6 779 aa8.82□□□□□ -1
VPS11-206ENST00000614944 ATP13A4Q4VNC1 1196 aa8.82□□□□□ -1
VPS11-206ENST00000614944 AFMIDQ63HM1 303 aa8.82□□□□□ -1
VPS11-206ENST00000614944 AADACL2Q6P093 401 aa8.82□□□□□ -1
VPS11-206ENST00000614944 PDZD4Q76G19 769 aaPredicted RBP8.82□□□□□ -1
VPS11-206ENST00000614944 ARPINQ7Z6K5 226 aa8.82□□□□□ -1
VPS11-206ENST00000614944 CDH26Q8IXH8 852 aa8.82□□□□□ -1
VPS11-206ENST00000614944 ZNF683Q8IZ20 524 aa8.82□□□□□ -1
VPS11-206ENST00000614944 CCDC185Q8N715 623 aa8.82□□□□□ -1
VPS11-206ENST00000614944 PLD5Q8N7P1 536 aa8.82□□□□□ -1
VPS11-206ENST00000614944 LHFPL5Q8TAF8 219 aa8.82□□□□□ -1
VPS11-206ENST00000614944 SLC7A14Q8TBB6 771 aa8.82□□□□□ -1
VPS11-206ENST00000614944 SLC22A17Q8WUG5 538 aa8.82□□□□□ -1
VPS11-206ENST00000614944 FBXO32Q969P5 355 aa8.82□□□□□ -1
VPS11-206ENST00000614944 ZSCAN5AQ9BUG6 496 aa8.82□□□□□ -1
VPS11-206ENST00000614944 AP1M1Q9BXS5 423 aa8.82□□□□□ -1
VPS11-206ENST00000614944 HOXD1Q9GZZ0 328 aa8.82□□□□□ -1
VPS11-206ENST00000614944 ADAM7Q9H2U9 754 aa8.82□□□□□ -1
VPS11-206ENST00000614944 BRD9Q9H8M2 597 aa8.82□□□□□ -1
VPS11-206ENST00000614944 NMUR1Q9HB89 426 aa8.82□□□□□ -1
VPS11-206ENST00000614944 PCDH9Q9HC56 1237 aa8.82□□□□□ -1
VPS11-206ENST00000614944 NR2E1Q9Y466 385 aa8.82□□□□□ -1
VPS11-206ENST00000614944 KIF26AQ9ULI4 1882 aaPredicted RBP8.82□□□□□ -1
VPS11-206ENST00000614944 TCRBV7S2A1N4TA0A589 114 aa8.81□□□□□ -1
VPS11-206ENST00000614944 WDR91A4D1P6 747 aa8.81□□□□□ -1
VPS11-206ENST00000614944 C2orf71A6NGG8 1288 aa8.81□□□□□ -1
VPS11-206ENST00000614944 H3BNC9 293 aa8.81□□□□□ -1
VPS11-206ENST00000614944 GRAP2O75791 330 aa8.81□□□□□ -1
VPS11-206ENST00000614944 USP1O94782 785 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ATP6V1B1P15313 513 aa8.81□□□□□ -1
VPS11-206ENST00000614944 TFE3P19532 575 aaPredicted RBP8.81□□□□□ -1
VPS11-206ENST00000614944 ITIH2P19823 946 aa8.81□□□□□ -1
VPS11-206ENST00000614944 EPHB3P54753 998 aa8.81□□□□□ -1
VPS11-206ENST00000614944 RNASE9P60153 205 aaKnown RBP8.81□□□□□ -1
VPS11-206ENST00000614944 RPL26P61254 145 aaKnown RBP8.81□□□□□ -1
VPS11-206ENST00000614944 ECT2LQ008S8 904 aa8.81□□□□□ -1
VPS11-206ENST00000614944 DDR2Q16832 855 aa8.81□□□□□ -1
VPS11-206ENST00000614944 MGAT5BQ3V5L5 792 aa8.81□□□□□ -1
VPS11-206ENST00000614944 UGT2A3Q6UWM9 527 aa8.81□□□□□ -1
VPS11-206ENST00000614944 SCN4BQ8IWT1 228 aa8.81□□□□□ -1
VPS11-206ENST00000614944 KLHDC8BQ8IXV7 354 aa8.81□□□□□ -1
VPS11-206ENST00000614944 PCDH19Q8TAB3 1148 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ENKURQ8TC29 256 aa8.81□□□□□ -1
VPS11-206ENST00000614944 RNF139Q8WU17 664 aa8.81□□□□□ -1
VPS11-206ENST00000614944 TOE1Q96GM8 510 aaKnown RBP8.81□□□□□ -1
VPS11-206ENST00000614944 TGS1Q96RS0 853 aaKnown RBP8.81□□□□□ -1
VPS11-206ENST00000614944 CDCA3Q99618 268 aaPredicted RBP8.81□□□□□ -1
VPS11-206ENST00000614944 LRRC3Q9BY71 257 aa8.81□□□□□ -1
VPS11-206ENST00000614944 WDCPQ9H6R7 721 aa8.81□□□□□ -1
VPS11-206ENST00000614944 TLR9Q9NR96 1032 aa8.81□□□□□ -1
VPS11-206ENST00000614944 SMARCAL1Q9NZC9 954 aa8.81□□□□□ -1
VPS11-206ENST00000614944 KIF17Q9P2E2 1029 aa8.81□□□□□ -1
VPS11-206ENST00000614944 MAPRE3Q9UPY8 281 aa8.81□□□□□ -1
VPS11-206ENST00000614944 PCM1Q15154 2024 aa8.81□□□□□ -1
VPS11-206ENST00000614944 PIK3R2O00459 728 aa8.81□□□□□ -1
VPS11-206ENST00000614944 BET1O15155 118 aa8.81□□□□□ -1
VPS11-206ENST00000614944 SHOXO15266 292 aa8.81□□□□□ -1
VPS11-206ENST00000614944 SSX5O60225 188 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ANPEPP15144 967 aa8.81□□□□□ -1
VPS11-206ENST00000614944 HSPA13P48723 471 aa8.81□□□□□ -1
VPS11-206ENST00000614944 MGAT5Q09328 741 aa8.81□□□□□ -1
VPS11-206ENST00000614944 CDC20Q12834 499 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ANKRD20A4Q4UJ75 823 aa8.81□□□□□ -1
VPS11-206ENST00000614944 BNC2Q6ZN30 1099 aaPredicted RBP8.81□□□□□ -1
VPS11-206ENST00000614944 CDKL3Q8IVW4 592 aaPredicted RBP8.81□□□□□ -1
VPS11-206ENST00000614944 FAM217AQ8IXS0 508 aa8.81□□□□□ -1
VPS11-206ENST00000614944 RAB3IL1Q8TBN0 382 aa8.81□□□□□ -1
VPS11-206ENST00000614944 GRAMD1AQ96CP6 724 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ARL5BQ96KC2 179 aa8.81□□□□□ -1
VPS11-206ENST00000614944 GDF15Q99988 308 aa8.81□□□□□ -1
VPS11-206ENST00000614944 GAL3ST1Q99999 423 aa8.81□□□□□ -1
VPS11-206ENST00000614944 FRMD8Q9BZ67 464 aaPredicted RBP8.81□□□□□ -1
VPS11-206ENST00000614944 DDX47Q9H0S4 455 aaKnown RBP8.81□□□□□ -1
VPS11-206ENST00000614944 PABPC3Q9H361 631 aaKnown RBP8.81□□□□□ -1
VPS11-206ENST00000614944 ZC4H2Q9NQZ6 224 aa8.81□□□□□ -1
VPS11-206ENST00000614944 DDIT4Q9NX09 232 aa8.81□□□□□ -1
VPS11-206ENST00000614944 OSER1Q9NX31 292 aa8.81□□□□□ -1
VPS11-206ENST00000614944 MBD2Q9UBB5 411 aa8.81□□□□□ -1
VPS11-206ENST00000614944 NUP50Q9UKX7 468 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ERGIC3Q9Y282 383 aa8.81□□□□□ -1
VPS11-206ENST00000614944 RPH3AQ9Y2J0 694 aaPredicted RBP8.81□□□□□ -1
VPS11-206ENST00000614944 CHD5Q8TDI0 1954 aa8.81□□□□□ -1
VPS11-206ENST00000614944 DOCK4Q8N1I0 1966 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ZNF840PA6NDX5 716 aa8.81□□□□□ -1
VPS11-206ENST00000614944 OR5K3A6NET4 321 aa8.81□□□□□ -1
VPS11-206ENST00000614944 DRGXA6NNA5 263 aa8.81□□□□□ -1
VPS11-206ENST00000614944 TXNDC9O14530 226 aa8.81□□□□□ -1
VPS11-206ENST00000614944 MTSS1O43312 755 aa8.81□□□□□ -1
VPS11-206ENST00000614944 CST8O60676 142 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ADAM11O75078 769 aa8.81□□□□□ -1
VPS11-206ENST00000614944 SEMA3DO95025 777 aa8.81□□□□□ -1
VPS11-206ENST00000614944 RARGP13631 454 aa8.81□□□□□ -1
VPS11-206ENST00000614944 DNAJB2P25686 324 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ECHS1P30084 290 aa8.81□□□□□ -1
VPS11-206ENST00000614944 PBX3P40426 434 aa8.81□□□□□ -1
VPS11-206ENST00000614944 ABCG1P45844 678 aa8.81□□□□□ -1
VPS11-206ENST00000614944 CLCN4P51793 760 aa8.81□□□□□ -1
VPS11-206ENST00000614944 RFX8Q6ZV50 586 aa8.81□□□□□ -1
VPS11-206ENST00000614944 PDSS2Q86YH6 399 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms