RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 C12orf40Q86WS4 652 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 OR2AP1Q8NGE2 309 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 PIH1D2Q8WWB5 315 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 C7orf26Q96N11 449 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 KLHL32Q96NJ5 620 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 OR52B2Q96RD2 323 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 MTIF3Q9H2K0 278 aaKnown RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 MRPL46Q9H2W6 279 aaKnown RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 ASB8Q9H765 288 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 ACTR5Q9H9F9 607 aaPredicted RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 ZFYVE1Q9HBF4 777 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 MRM3Q9HC36 420 aaKnown RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 TNFRSF12AQ9NP84 129 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 NLE1Q9NVX2 485 aaPredicted RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 OXSMQ9NWU1 459 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 MKS1Q9NXB0 559 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 NCKIPSDQ9NZQ3 722 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 STOML2Q9UJZ1 356 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 IKZF3Q9UKT9 509 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 ARHGAP26Q9UNA1 814 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 APOBEC2Q9Y235 224 aaKnown RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 ZNF711Q9Y462 761 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 COMMD10Q9Y6G5 202 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 SLC30A1Q9Y6M5 507 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 GON4LQ3T8J9 2241 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 MIA3Q5JRA6 1907 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 PLXNA4Q9HCM2 1894 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 CCDC85CA6NKD9 419 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 E5RI56 91 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 KLF11O14901 512 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 LINC01565O15544 149 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 DCXO43602 365 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 UNC5CO95185 931 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 PGLSO95336 258 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 PAPSS2O95340 614 aaPredicted RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 PRAMEF1O95521 474 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 IGSF6O95976 241 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 GFAPP14136 432 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 NQO1P15559 274 aaKnown RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 SERPINB5P36952 375 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 WASP42768 502 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 IDH3AP50213 366 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 CLCN5P51795 746 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 METAP1P53582 386 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 ECT2LQ008S8 904 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 TIAL1Q01085 375 aaKnown RBP eCLIP3.43□□□□□ -1.86
LIG4-205ENST00000614526 GRM2Q14416 872 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 OR4D1Q15615 310 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 TSNQ15631 228 aaKnown RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 INO80DQ53TQ3 878 aaPredicted RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 ARSIQ5FYB1 569 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 SH2D4BQ5SQS7 431 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 ZNF648Q5T619 568 aaPredicted RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 AGAP9Q5VTM2 703 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 LIPMQ5VYY2 423 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 SCIMPQ6UWF3 145 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 ZYG11AQ6WRX3 759 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 RINLQ6ZS11 566 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 ISCA2Q86U28 154 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 LONP2Q86WA8 852 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 CPNE9Q8IYJ1 553 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 PHTF2Q8N3S3 785 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 SP7Q8TDD2 431 aaPredicted RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 SCAMP4Q969E2 229 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 FATE1Q969F0 183 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 ACDQ96AP0 544 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 ZNF707Q96C28 371 aaPredicted RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 CLPTM1LQ96KA5 538 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 NSUN5Q96P11 429 aaKnown RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 RANBP9Q96S59 729 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 PLCD4Q9BRC7 762 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 ILKAPQ9H0C8 392 aaPredicted RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 DUS2Q9NX74 493 aaKnown RBP3.43□□□□□ -1.86
LIG4-205ENST00000614526 PTGDR2Q9Y5Y4 395 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 IRAK3Q9Y616 596 aa3.43□□□□□ -1.86
LIG4-205ENST00000614526 PTPRSQ13332 1948 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 KNL1Q8NG31 2342 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 KRT87PA6NCN2 255 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 NPEPPSL1A6NEC2 478 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 A8MT66 165 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 B2RBV5 119 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SUPT3HB4E1H0 165 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 H0Y3Z8 333 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 GFRA2O00451 464 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 BTN3A1O00481 513 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SUPT3HO75486 399 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 GUCA1CO95843 209 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 GSTA1P08263 222 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CHRM1P11229 460 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 POLR2EP19388 210 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 GRK2P25098 689 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 RECQLP46063 649 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 NME5P56597 212 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ELF3P78545 371 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 E2F5Q15329 346 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 DHCR24Q15392 516 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CHRNA6Q15825 494 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 MYLK3Q32MK0 819 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 C18orf21Q32NC0 220 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 TTC31Q49AM3 519 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms