RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TMPRSS11AQ6ZMR5 421 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 FAM43BQ6ZT52 329 aaPredicted RBP17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 RNF44Q7L0R7 432 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 CPSF7Q8N684 471 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 P2RY11Q96G91 374 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 SOHLH2Q9NX45 425 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 PFDN2Q9UHV9 154 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 ZNF214Q9UL59 606 aaPredicted RBP17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 C5orf60A6NFR6 353 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 PBX1P40424 430 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 ABCG1P45844 678 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 RAB2AP61019 212 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 CYP4F2P78329 520 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 HSF2Q03933 536 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 CYP4F3Q08477 520 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 CPTPQ5TA50 214 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 VSTM1Q6UX27 236 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 PJA1Q8NG27 643 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 NKD2Q969F2 451 aaPredicted RBP17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 HDAC10Q969S8 669 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 KLHL32Q96NJ5 620 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 NXF3Q9H4D5 531 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 PLOD3O60568 738 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 EPHA3P29320 983 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 IL18R1Q13478 541 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 BEND5Q7L4P6 421 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 TRPV1Q8NER1 839 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 RHBGQ9H310 441 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 DSN1Q9H410 356 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 PTX3P26022 381 aaPredicted RBP17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 CXCR3P49682 368 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 BTN2A3PQ96KV6 586 aa17.38■□□□□ 0.37
HMGXB3-206ENST00000613459 GNPDA1P46926 289 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 MARCKSL1P49006 195 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 KLF10Q13118 480 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 ATP13A4Q4VNC1 1196 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 ADGRG2Q8IZP9 1017 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SRFBP1Q8NEF9 429 aaKnown RBP17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 TRPV3Q8NET8 790 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 OR2T34Q8NGX1 318 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 OR2T3Q8NH03 318 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 ELMO3Q96BJ8 720 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SPACA7Q96KW9 195 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 NECTIN3Q9NQS3 549 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 A0A0J9YYE9 177 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SMIM35A0A1B0GVV1 85 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 GSC2O15499 205 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 UGT2B17O75795 530 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 LINC00032P0C843 101 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 ETS2P15036 469 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 MED22Q15528 200 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 TEX44Q53QW1 395 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 PIH1D2Q8WWB5 315 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 C1QTNF1Q9BXJ1 281 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 HMGXB4Q9UGU5 601 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 FAM92AA1XBS5 289 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 EPHB6O15197 1021 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 IPO13O94829 963 aaKnown RBP17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 MMP8P22894 467 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SDC2P34741 201 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 YBEYP58557 167 aaPredicted RBP17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SMCO1Q147U7 214 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SIX5Q8N196 739 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 TMEM199Q8N511 208 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 COL26A1Q96A83 441 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 LGMNQ99538 433 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 ZFYVE1Q9HBF4 777 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 ARL8BQ9NVJ2 186 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 POLR3HQ9Y535 204 aaPredicted RBP17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 ADGRB2O60241 1585 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SLC28A2O43868 658 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 TM7SF2O76062 418 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SPATA31C1P0DKV0 1188 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 ZFP69Q49AA0 526 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SERPINA13PQ6UXR4 307 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 PGAM4Q8N0Y7 254 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 C12orf50Q8NA57 414 aaPredicted RBP17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SLC4A11Q8NBS3 891 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 AIF1LQ9BQI0 150 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 GTPBP1O00178 669 aaKnown RBP17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 SLC22A2O15244 555 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 DDX3YO15523 660 aaKnown RBP17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 VGLL4Q14135 290 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 DET1Q7L5Y6 550 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 IQCKQ8N0W5 287 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 RASSF5Q8WWW0 418 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 TMPRSS4Q9NRS4 437 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 DNAJC11Q9NVH1 559 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 USP20Q9Y2K6 914 aa17.37■□□□□ 0.37
HMGXB3-206ENST00000613459 RCCD1A6NED2 376 aa17.36■□□□□ 0.37
HMGXB3-206ENST00000613459 CACNB4O00305 520 aaPredicted RBP17.36■□□□□ 0.37
HMGXB3-206ENST00000613459 GRM6O15303 877 aa17.36■□□□□ 0.37
HMGXB3-206ENST00000613459 NDUFS2O75306 463 aa17.36■□□□□ 0.37
HMGXB3-206ENST00000613459 TULP3O75386 442 aa17.36■□□□□ 0.37
HMGXB3-206ENST00000613459 TAS2R41P59536 307 aa17.36■□□□□ 0.37
HMGXB3-206ENST00000613459 MAP2K5Q13163 448 aa17.36■□□□□ 0.37
HMGXB3-206ENST00000613459 TNFAIP8L3Q5GJ75 292 aa17.36■□□□□ 0.37
HMGXB3-206ENST00000613459 CHST15Q7LFX5 561 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms