RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 PCDH12Q9NPG4 1184 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 RSPH14Q9UHP6 348 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 TRHDEQ9UKU6 1024 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 SPTY2D1-AS1A0A0U1RR47 76 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 A0A1W2PNU3 283 aaPredicted RBP17.68■□□□□ 0.42
MUC1-224ENST00000611577 TCRBV7S2A1N4TA0A589 114 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 TRAFD1O14545 582 aaPredicted RBP17.68■□□□□ 0.42
MUC1-224ENST00000611577 RAD51BO15315 384 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 HTRA2O43464 458 aaPredicted RBP17.68■□□□□ 0.42
MUC1-224ENST00000611577 PGLSO95336 258 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 PAK4O96013 591 aaPredicted RBP17.68■□□□□ 0.42
MUC1-224ENST00000611577 CSF2P04141 144 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 RABIFP47224 123 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 NIPAL4Q0D2K0 466 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 WASHC5Q12768 1159 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 LONRF2Q1L5Z9 754 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 DEFB133Q30KQ1 61 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 FAM182AQ5T1J6 154 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 IGF2-ASQ6U949 168 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 CRTC1Q6UUV9 634 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 USP45Q70EL2 814 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 ZNF567Q8N184 647 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 ARRDC2Q8TBH0 407 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 VOPP1Q96AW1 172 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 TRIM44Q96DX7 344 aaPredicted RBP17.68■□□□□ 0.42
MUC1-224ENST00000611577 PBKQ96KB5 322 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 FRMD8P1Q9BZ68 369 aaPredicted RBP17.68■□□□□ 0.42
MUC1-224ENST00000611577 SLC25A51Q9H1U9 297 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 NCKIPSDQ9NZQ3 722 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 GGT7Q9UJ14 662 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 PHTF1Q9UMS5 762 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 CHKBQ9Y259 395 aa17.68■□□□□ 0.42
MUC1-224ENST00000611577 PIEZO2Q9H5I5 2752 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 F5H423 210 aaPredicted RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 RIOK3O14730 519 aaKnown RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 AQP9O43315 295 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 TM7SF2O76062 418 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 ATP1A1P05023 1023 aaKnown RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 CYP2A6P11509 494 aaPredicted RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 C6P13671 934 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 ITIH2P19823 946 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 NFKB1P19838 968 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 PDE1CQ14123 709 aaPredicted RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 PCSK7Q16549 785 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 CCDC70Q6NSX1 233 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 FOXR1Q6PIV2 292 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 RBM44Q6ZP01 1051 aaKnown RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 ZSWIM9Q86XI8 627 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 LPCAT1Q8NF37 534 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 LMX1AQ8TE12 382 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 SNRNP27Q8WVK2 155 aaKnown RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 ATG4AQ8WYN0 398 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 IMP4Q96G21 291 aaKnown RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 NSMCE3Q96MG7 304 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 C1QTNF7Q9BXJ2 289 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 TDRD1Q9BXT4 1180 aaKnown RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 ADGRE3Q9BY15 652 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 PCDH9Q9HC56 1237 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 R3HDM2Q9Y2K5 976 aaKnown RBP17.67■□□□□ 0.42
MUC1-224ENST00000611577 CSNK1G3Q9Y6M4 447 aa17.67■□□□□ 0.42
MUC1-224ENST00000611577 CFAP69A5D8W1 941 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 IGLON5A6NGN9 336 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 A8MX80 341 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 B8ZZF3 427 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 PYCARD-AS1I3L0S3 204 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 FPGTO14772 594 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 AREL1O15033 823 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 MMP20O60882 483 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 PMPCBO75439 489 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 JUNDP17535 347 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 MMP12P39900 470 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 SKOR1P84550 965 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 SNX1Q13596 522 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 ARHGEF7Q14155 803 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 PRPSAP1Q14558 356 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 NR0B2Q15466 257 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 TMEM52BQ4KMG9 183 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 TPRG1LQ5T0D9 272 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 KIAA1614Q5VZ46 1190 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 ARHGEF18Q6ZSZ5 1173 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 KDELC2Q7Z4H8 507 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 C1orf54Q8WWF1 131 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 GRAMD1AQ96CP6 724 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 CCDC97Q96F63 343 aaPredicted RBP17.66■□□□□ 0.42
MUC1-224ENST00000611577 SLC46A1Q96NT5 459 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 KLF15Q9UIH9 416 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 DNPEPQ9ULA0 475 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 ZNF148Q9UQR1 794 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 ENTPD2Q9Y5L3 495 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 HECTD1Q9ULT8 2610 aa17.66■□□□□ 0.42
MUC1-224ENST00000611577 PMS2P1A4D2B8 440 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 EME2A4GXA9 379 aaPredicted RBP17.65■□□□□ 0.42
MUC1-224ENST00000611577 ELFN1P0C7U0 828 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 CTPS1P17812 591 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 VIPR1P32241 457 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 ANKRD20A2Q5SQ80 823 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 ANKRD20A1Q5TYW2 823 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 ANKRD20A3Q5VUR7 823 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 DENND2CQ68D51 928 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 FAM71DQ8N9W8 422 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms