RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 CDK3Q00526 305 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 PTPRRQ15256 657 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 OASLQ15646 514 aaKnown RBP14.23□□□□□ -0.13
HDDC2-209ENST00000609477 CCNG2Q16589 344 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 ZNF542PQ5EBM4 170 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 SIRPB2Q5JXA9 342 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 HENMT1Q5T8I9 393 aaKnown RBP14.23□□□□□ -0.13
HDDC2-209ENST00000609477 ZCCHC8Q6NZY4 707 aaKnown RBP14.23□□□□□ -0.13
HDDC2-209ENST00000609477 RANBP10Q6VN20 620 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 ARHGEF18Q6ZSZ5 1173 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 LYSMD3Q7Z3D4 306 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 KDELC2Q7Z4H8 507 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 HEATR4Q86WZ0 1026 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 REXO1L1PQ8IX06 675 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 FAM71DQ8N9W8 422 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 SCG3Q8WXD2 468 aaKnown RBP14.23□□□□□ -0.13
HDDC2-209ENST00000609477 ADAMTS14Q8WXS8 1223 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 GLMNQ92990 594 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 PLEKHG4BQ96PX9 1271 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 FAM118BQ9BPY3 351 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 GPR63Q9BZJ6 419 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 KCNF1Q9H3M0 494 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 ARNT2Q9HBZ2 717 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 UCKL1Q9NWZ5 548 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 R3HDM2Q9Y2K5 976 aaKnown RBP14.23□□□□□ -0.13
HDDC2-209ENST00000609477 ZNF711Q9Y462 761 aa14.23□□□□□ -0.13
HDDC2-209ENST00000609477 TCRBV7S2A1N4TA0A589 114 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 MED19A0JLT2 244 aaPredicted RBP14.22□□□□□ -0.13
HDDC2-209ENST00000609477 TMEM202A6NGA9 273 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 ERI2A8K979 691 aaKnown RBP14.22□□□□□ -0.13
HDDC2-209ENST00000609477 K7ESM1 405 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 KIF5CO60282 957 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 GIMD1P0DJR0 217 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 ACP1P24666 158 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 ADRA1AP35348 466 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 DUSP3P51452 185 aaPredicted RBP14.22□□□□□ -0.13
HDDC2-209ENST00000609477 PDE1BQ01064 536 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 PEX6Q13608 980 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 ALG11Q2TAA5 492 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 PROX2Q3B8N5 592 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 PRRT3Q5FWE3 981 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 GKN2Q86XP6 184 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 HID1Q8IV36 788 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 IPMKQ8NFU5 416 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 CCDC110Q8TBZ0 833 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 HIC2Q96JB3 615 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 PBKQ96KB5 322 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 SMIM14Q96QK8 99 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 TMEM121Q9BTD3 319 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 ZSCAN5AQ9BUG6 496 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 LRRC61Q9BV99 259 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 LGR4Q9BXB1 951 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 FRMD8Q9BZ67 464 aaPredicted RBP14.22□□□□□ -0.13
HDDC2-209ENST00000609477 C10orf88Q9H8K7 445 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 DRG1Q9Y295 367 aaKnown RBP14.22□□□□□ -0.13
HDDC2-209ENST00000609477 SLC17A4Q9Y2C5 497 aa14.22□□□□□ -0.13
HDDC2-209ENST00000609477 TDRD6O60522 2096 aaKnown RBP14.22□□□□□ -0.13
HDDC2-209ENST00000609477 LRP4O75096 1905 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 PRSS38A1L453 326 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 GPR89AB7ZAQ6 455 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 TRIM38O00635 465 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 SIGLEC6O43699 453 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 SOD1P00441 154 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 FGGP02679 453 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 IVLP07476 585 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 ANXA6P08133 673 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 GPR89BP0CG08 455 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 CKMT1AP12532 417 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 PSMB4P28070 264 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 C4orf22Q6V702 233 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 KDM7AQ6ZMT4 941 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 RAB44Q7Z6P3 723 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-209ENST00000609477 PELI3Q8N2H9 469 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 TRAM1L1Q8N609 369 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 LMX1AQ8TE12 382 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 SCAMP4Q969E2 229 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 TSACCQ96A04 125 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-209ENST00000609477 EID2BQ96D98 161 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 SCARF2Q96GP6 870 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-209ENST00000609477 COX14Q96I36 57 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 NAP1L3Q99457 506 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-209ENST00000609477 GORASP1Q9BQQ3 440 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 RIOK2Q9BVS4 552 aaKnown RBP14.21□□□□□ -0.13
HDDC2-209ENST00000609477 RMI1Q9H9A7 625 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 TRNAU1APQ9NX07 287 aaKnown RBP14.21□□□□□ -0.13
HDDC2-209ENST00000609477 TOR4AQ9NXH8 423 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 VPS18Q9P253 973 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 CD84Q9UIB8 345 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 PNMA8BQ9ULN7 279 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-209ENST00000609477 TTC7AQ9ULT0 858 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-209ENST00000609477 SHOC2Q9UQ13 582 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 ZNF148Q9UQR1 794 aa14.21□□□□□ -0.13
HDDC2-209ENST00000609477 ARID1BQ8NFD5 2236 aaPredicted RBP14.21□□□□□ -0.14
HDDC2-209ENST00000609477 A0A0U1RQS6 177 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 FAM221BA6H8Z2 402 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 GOLGA8CPA6NN73 597 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 CES2O00748 559 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 CEACAM5P06731 702 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 GP1BAP07359 652 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 FDFT1P37268 417 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms