RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TEAD1P28347 426 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 SERPINB6P35237 376 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 DPTQ07507 201 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 NR1D2Q14995 579 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 TMEM164Q5U3C3 297 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 NKAIN2Q5VXU1 208 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 DOK6Q6PKX4 331 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 XKR5Q6UX68 686 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 USP45Q70EL2 814 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 NDUFAF2Q8N183 169 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 TEKT4Q8WW24 435 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 SEMA3CQ99985 751 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 ARHGAP9Q9BRR9 750 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 ASH1LQ9NR48 2969 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 TRBV23OR9-2A0A075B6M9 112 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 FZD6O60353 706 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 FGF3P11487 239 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 WT1P19544 449 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 CD82P27701 267 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 ACTR1BP42025 376 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 GPR3P46089 330 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 ZNF165P49910 485 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 LIMK2P53671 638 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 ACTR1AP61163 376 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 PTSQ03393 145 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 NFATC3Q12968 1075 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 PEX6Q13608 980 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 KRT81Q14533 505 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 CLPPQ16740 277 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 TDRD12Q587J7 1177 aaKnown RBP13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 HGSNATQ68CP4 663 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 LRRC66Q68CR7 880 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 TEX26Q8N6G2 289 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 ZSCAN1Q8NBB4 408 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 JPH3Q8WXH2 748 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 SCAMP4Q969E2 229 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 AP2M1Q96CW1 435 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 SCARF2Q96GP6 870 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 CCDC74BQ96LY2 380 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 TAAR9Q96RI9 348 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 AGAP2Q99490 1192 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 B3GNT4Q9C0J1 378 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 THAP2Q9H0W7 228 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 IP6K2Q9UHH9 426 aa13.33□□□□□ -0.28
POLR2J3-219ENST00000608621 IGHV1OR21-1A0A087WYE8 117 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 A0A0J9YYE9 177 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 HGSO14964 777 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 SOD1P00441 154 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 SERPINC1P01008 464 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 TRBC1P01850 177 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 ITGB2P05107 769 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 CD48P09326 243 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 MPSTP25325 297 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 SSR1P43307 286 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 EPHB1P54762 984 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 CYP4F2P78329 520 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 SQSTM1Q13501 440 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 IHHQ14623 411 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 TBR1Q16650 682 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 ATP13A4Q4VNC1 1196 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 PYCR3Q53H96 274 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 FIGNQ5HY92 759 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 CCDC122Q5T0U0 273 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 ADAMTSL4Q6UY14 1074 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 MARK2Q7KZI7 788 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 TRIM74Q86UV6 250 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 NLRP8Q86W28 1048 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 NIPA2Q8N8Q9 360 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 OR2M4Q96R27 311 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 NUP85Q9BW27 656 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 FAM117AQ9C073 453 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 POLR1EQ9GZS1 481 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 CDH19Q9H159 772 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 ANAPC7Q9UJX3 599 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 PCDHGA4Q9Y5G9 962 aa13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 BZW2Q9Y6E2 419 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-219ENST00000608621 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 MYO1FO00160 1098 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 MATN3O15232 486 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 MAP3K6O95382 1288 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 ASMTLO95671 621 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 CYP1A2P05177 515 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 ZNF30P17039 623 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 ITGB6P18564 788 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 GARSP41250 739 aaKnown RBP13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 ARSDP51689 593 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 DSC2Q02487 901 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 KCNC4Q03721 635 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 TRA2AQ13595 282 aaKnown RBP eCLIP13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 IQCB1Q15051 598 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 NFKBIBQ15653 356 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 HADHQ16836 314 aaKnown RBP13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 PRICKLE2Q7Z3G6 844 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 OR4D9Q8NGE8 314 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 FAM71BQ8TC56 605 aa13.31□□□□□ -0.28
POLR2J3-219ENST00000608621 NKD1Q969G9 470 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms