RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 CDK3Q00526 305 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 PTPRRQ15256 657 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 OASLQ15646 514 aaKnown RBP14.23□□□□□ -0.13
HDDC2-206ENST00000608461 CCNG2Q16589 344 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 ZNF542PQ5EBM4 170 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 SIRPB2Q5JXA9 342 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 HENMT1Q5T8I9 393 aaKnown RBP14.23□□□□□ -0.13
HDDC2-206ENST00000608461 ZCCHC8Q6NZY4 707 aaKnown RBP14.23□□□□□ -0.13
HDDC2-206ENST00000608461 RANBP10Q6VN20 620 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 ARHGEF18Q6ZSZ5 1173 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 LYSMD3Q7Z3D4 306 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 KDELC2Q7Z4H8 507 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 HEATR4Q86WZ0 1026 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 REXO1L1PQ8IX06 675 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 FAM71DQ8N9W8 422 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 SCG3Q8WXD2 468 aaKnown RBP14.23□□□□□ -0.13
HDDC2-206ENST00000608461 ADAMTS14Q8WXS8 1223 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 GLMNQ92990 594 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 PLEKHG4BQ96PX9 1271 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 FAM118BQ9BPY3 351 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 GPR63Q9BZJ6 419 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 KCNF1Q9H3M0 494 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 ARNT2Q9HBZ2 717 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 UCKL1Q9NWZ5 548 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 R3HDM2Q9Y2K5 976 aaKnown RBP14.23□□□□□ -0.13
HDDC2-206ENST00000608461 ZNF711Q9Y462 761 aa14.23□□□□□ -0.13
HDDC2-206ENST00000608461 TCRBV7S2A1N4TA0A589 114 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 MED19A0JLT2 244 aaPredicted RBP14.22□□□□□ -0.13
HDDC2-206ENST00000608461 TMEM202A6NGA9 273 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 ERI2A8K979 691 aaKnown RBP14.22□□□□□ -0.13
HDDC2-206ENST00000608461 K7ESM1 405 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 KIF5CO60282 957 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 GIMD1P0DJR0 217 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 ACP1P24666 158 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 ADRA1AP35348 466 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 DUSP3P51452 185 aaPredicted RBP14.22□□□□□ -0.13
HDDC2-206ENST00000608461 PDE1BQ01064 536 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 PEX6Q13608 980 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 ALG11Q2TAA5 492 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 PROX2Q3B8N5 592 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 PRRT3Q5FWE3 981 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 GKN2Q86XP6 184 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 HID1Q8IV36 788 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 IPMKQ8NFU5 416 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 CCDC110Q8TBZ0 833 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 HIC2Q96JB3 615 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 PBKQ96KB5 322 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 SMIM14Q96QK8 99 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 TMEM121Q9BTD3 319 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 ZSCAN5AQ9BUG6 496 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 LRRC61Q9BV99 259 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 LGR4Q9BXB1 951 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 FRMD8Q9BZ67 464 aaPredicted RBP14.22□□□□□ -0.13
HDDC2-206ENST00000608461 C10orf88Q9H8K7 445 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 DRG1Q9Y295 367 aaKnown RBP14.22□□□□□ -0.13
HDDC2-206ENST00000608461 SLC17A4Q9Y2C5 497 aa14.22□□□□□ -0.13
HDDC2-206ENST00000608461 TDRD6O60522 2096 aaKnown RBP14.22□□□□□ -0.13
HDDC2-206ENST00000608461 LRP4O75096 1905 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 PRSS38A1L453 326 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 GPR89AB7ZAQ6 455 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 TRIM38O00635 465 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 SIGLEC6O43699 453 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 SOD1P00441 154 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 FGGP02679 453 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 IVLP07476 585 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 ANXA6P08133 673 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 GPR89BP0CG08 455 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 CKMT1AP12532 417 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 PSMB4P28070 264 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 C4orf22Q6V702 233 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 KDM7AQ6ZMT4 941 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 RAB44Q7Z6P3 723 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-206ENST00000608461 PELI3Q8N2H9 469 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 TRAM1L1Q8N609 369 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 LMX1AQ8TE12 382 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 SCAMP4Q969E2 229 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 TSACCQ96A04 125 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-206ENST00000608461 EID2BQ96D98 161 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 SCARF2Q96GP6 870 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-206ENST00000608461 COX14Q96I36 57 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 NAP1L3Q99457 506 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-206ENST00000608461 GORASP1Q9BQQ3 440 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 RIOK2Q9BVS4 552 aaKnown RBP14.21□□□□□ -0.13
HDDC2-206ENST00000608461 RMI1Q9H9A7 625 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 TRNAU1APQ9NX07 287 aaKnown RBP14.21□□□□□ -0.13
HDDC2-206ENST00000608461 TOR4AQ9NXH8 423 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 VPS18Q9P253 973 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 CD84Q9UIB8 345 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 PNMA8BQ9ULN7 279 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-206ENST00000608461 TTC7AQ9ULT0 858 aaPredicted RBP14.21□□□□□ -0.13
HDDC2-206ENST00000608461 SHOC2Q9UQ13 582 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 ZNF148Q9UQR1 794 aa14.21□□□□□ -0.13
HDDC2-206ENST00000608461 ARID1BQ8NFD5 2236 aaPredicted RBP14.21□□□□□ -0.14
HDDC2-206ENST00000608461 A0A0U1RQS6 177 aa14.2□□□□□ -0.14
HDDC2-206ENST00000608461 FAM221BA6H8Z2 402 aa14.2□□□□□ -0.14
HDDC2-206ENST00000608461 GOLGA8CPA6NN73 597 aa14.2□□□□□ -0.14
HDDC2-206ENST00000608461 CES2O00748 559 aa14.2□□□□□ -0.14
HDDC2-206ENST00000608461 CEACAM5P06731 702 aa14.2□□□□□ -0.14
HDDC2-206ENST00000608461 GP1BAP07359 652 aa14.2□□□□□ -0.14
HDDC2-206ENST00000608461 FDFT1P37268 417 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms