RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 NFKBIAP25963 317 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 VARSP26640 1264 aaKnown RBP15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 NFATC2Q13469 925 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SEMA5AQ13591 1074 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 INPP5JQ15735 1006 aaPredicted RBP15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 PYROXD2Q8N2H3 581 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SFRP1Q8N474 314 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 TSEN2Q8NCE0 465 aaKnown RBP15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 GPT2Q8TD30 523 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 FAM172AQ8WUF8 416 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 NTAN1Q96AB6 310 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CINPQ9BW66 212 aaPredicted RBP15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SLAMF7Q9NQ25 335 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CACNA1DQ01668 2161 aa15.31■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ITPR2Q14571 2701 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 LRCH4O75427 683 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SORBS2O94875 1100 aaKnown RBP15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 RECKO95980 971 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ZNF28P17035 718 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ETV3P41162 512 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 PTPN9P43378 593 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 RGRP47804 291 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SCNN1BP51168 640 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 LRP8Q14114 963 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 NAA30Q147X3 362 aaPredicted RBP15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CNGA3Q16281 694 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 C1QL3Q5VWW1 255 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 NAA35Q5VZE5 725 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 MARK2Q7KZI7 788 aaKnown RBP15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 PLXDC1Q8IUK5 500 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 UMODL1-AS1Q8N2C9 162 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 LZTR1Q8N653 840 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SEC14L1Q92503 715 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 DTD2Q96FN9 168 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 TIGD1Q96MW7 591 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ARHGEF17Q96PE2 2063 aaPredicted RBP15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 TRIM55Q9BYV6 548 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 PDFQ9HBH1 243 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SARS2Q9NP81 518 aaKnown RBP15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 LNPEPQ9UIQ6 1025 aa15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ANKRD17O75179 2603 aaKnown RBP15.3■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 PRAMEF11O60813 436 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 KIAA0754O94854 1291 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 NDUFA10O95299 355 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 GPR1P46091 355 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 EPHA4P54764 986 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 HDAC4P56524 1084 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SCYL2Q6P3W7 929 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SLC9B2Q86UD5 537 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 GALNT13Q8IUC8 556 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 PDCD6IPQ8WUM4 868 aaKnown RBP15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 C5orf34Q96MH7 638 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 EPB41L1Q9H4G0 881 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SIX2Q9NPC8 291 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ACSS2Q9NR19 701 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CNOT8Q9UFF9 292 aaKnown RBP15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ERRFI1Q9UJM3 462 aaPredicted RBP15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 TMEM98Q9Y2Y6 226 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 PCDHGA9Q9Y5G4 932 aaKnown RBP15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 PCDHGA6Q9Y5G7 932 aa15.29■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 WIPF3A6NGB9 483 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ARHGAP42A6NI28 874 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 C2CD4BA6NLJ0 364 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 WASH4PA8MWX3 477 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 BIN1O00499 593 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 TRAFD1O14545 582 aaPredicted RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 FGF10O15520 208 aaPredicted RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 HEXIM1O94992 359 aaKnown RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 LDLRP01130 860 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 MT-ND3P03897 115 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ANKRD34CP0C6C1 535 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CYP2A6P11509 494 aaPredicted RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 VIPR1P32241 457 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 GARSP41250 739 aaKnown RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CCL11P51671 97 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 NOMO3P69849 1222 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 NSUN2Q08J23 767 aaKnown RBP eCLIP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 DNASE1L3Q13609 305 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 JOSD2Q8TAC2 188 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CENPIQ92674 756 aaPredicted RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CELF6Q96J87 481 aaKnown RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ELMO2Q96JJ3 720 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 OR6C1Q96RD1 312 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 ZNF768Q9H5H4 540 aaKnown RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SIDT1Q9NXL6 827 aaKnown RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 PADI1Q9ULC6 663 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 G3BP2Q9UN86 482 aaKnown RBP15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 CELSR2Q9HCU4 2923 aa15.28■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.27■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 A0A1W2PQ67 120 aa15.27■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 DPM1O60762 260 aa15.27■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 MMEP08473 750 aa15.27■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 SLC2A4P14672 509 aa15.27■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 TEAD1P28347 426 aa15.27■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 NDST2P52849 883 aa15.27■□□□□ 0.04
NEDD8-MDP1-204ENST00000605847 AP1S1P61966 158 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms