RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TRIM49D1C9J1S8 452 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 SPINT1O43278 529 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 RPP40O75818 363 aaKnown RBP17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 CRTAMO95727 393 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 GMPRP36959 345 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 PGGT1BP53609 377 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 CRTC1Q6UUV9 634 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 RFLNAQ6ZTI6 216 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 CNTN4Q8IWV2 1026 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 CHPFQ8IZ52 775 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 OR6P1Q8NGX9 317 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 STYXQ8WUJ0 223 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 C10orf82Q8WW14 230 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 CDKL2Q92772 493 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 ERP27Q96DN0 273 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 THOC1Q96FV9 657 aaKnown RBP17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 MCCC1Q96RQ3 725 aaPredicted RBP17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 MCMBPQ9BTE3 642 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 TRPV5Q9NQA5 729 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 STK38LQ9Y2H1 464 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 L3MBTL1Q9Y468 752 aa17.32■□□□□ 0.36
PPFIA3-207ENST00000602716 GOLGA8RI6L899 631 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 KPNA3O00505 521 aaPredicted RBP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 ATP5HO75947 161 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 TIMP2P16035 220 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 LPOP22079 712 aaPredicted RBP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 CCND1P24385 295 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 PRAMEP78395 509 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 ENPP2Q13822 863 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 C2orf27AQ580R0 203 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 TMEM196Q5HYL7 178 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 MROH9Q5TGP6 573 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 LRRC66Q68CR7 880 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 NEPROQ6NW34 567 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 ZNF449Q6P9G9 518 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 LVRNQ6Q4G3 990 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 ZNF75CPQ92670 426 aaPredicted RBP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 DNASE1L2Q92874 299 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 CDKN2AIPNLQ96HQ2 116 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 LRRC37BQ96QE4 947 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 GPR63Q9BZJ6 419 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 LRMDAQ9H2I8 198 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 IL17CQ9P0M4 197 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 ZNF180Q9UJW8 692 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 PPM1HQ9ULR3 514 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 IKBKGQ9Y6K9 419 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 LOC730098B7Z3J9 87 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 DCTN3O75935 186 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 HNRNPLP14866 589 aaKnown RBP eCLIP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 PAMP19021 973 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 CA5AP35218 305 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 GP5P40197 560 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 CDKN1CP49918 316 aaPredicted RBP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 ELAVL3Q14576 367 aaKnown RBP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 GRM3Q14832 879 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 UGP2Q16851 508 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 ZNF805Q5CZA5 627 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 KIAA1211LQ6NV74 962 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 NLRP9Q7RTR0 991 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 RALGPS2Q86X27 583 aaPredicted RBP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 MMAAQ8IVH4 418 aaKnown RBP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 GPATCH11Q8N954 259 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 PIP4K2CQ8TBX8 421 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 OR8D1Q8WZ84 308 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 UTP4Q969X6 686 aaKnown RBP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 SCRN2Q96FV2 425 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 MFSD1Q9H3U5 465 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 PCDH12Q9NPG4 1184 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 FBXO6Q9NRD1 293 aaPredicted RBP17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 PPIL1Q9Y3C6 166 aa17.31■□□□□ 0.36
PPFIA3-207ENST00000602716 F5P12259 2224 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 C2orf81A6NN90 581 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 C16orf96A6NNT2 1141 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 GAPDHSO14556 408 aaPredicted RBP17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 SLC7A4O43246 635 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 PSMA3P25788 255 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 ALDH3A1P30838 453 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 NAB1Q13506 487 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 PEX6Q13608 980 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 ARMC3Q5W041 872 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 OTOAQ7RTW8 1153 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 MAFAQ8NHW3 353 aaPredicted RBP17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 RAB3IPQ96QF0 476 aaPredicted RBP17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 LYSMD1Q96S90 227 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 RBBP8Q99708 897 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 CPNE1Q99829 537 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 CXorf56Q9H5V9 222 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 ZFYVE1Q9HBF4 777 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 HACD3Q9P035 362 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 RIMKLBQ9ULI2 386 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 UPK3BL1B0FP48 263 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 UPK3BL2E5RIL1 263 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 STX7O15400 261 aaKnown RBP17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 ADAM23O75077 832 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 WFS1O76024 890 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 ANP32DO95626 131 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 ITGA2BP08514 1039 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 C1SP09871 688 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 HMGCLP35914 325 aa17.3■□□□□ 0.36
PPFIA3-207ENST00000602716 PSMD8P48556 350 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms