RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 LCKP06239 509 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF250P15622 560 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 TCN1P20061 433 aaPredicted RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PTAFRP25105 342 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ADRA1BP35368 520 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 GRM5P41594 1212 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 CLCN5P51795 746 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PSMC6P62333 389 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF33AQ06730 810 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 MTMR1Q13613 665 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 GRM7Q14831 915 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PON3Q15166 354 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 SSX2Q16385 188 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 LRRC24Q50LG9 513 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 FSCBQ5H9T9 825 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 C11orf63Q6NUN7 778 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 MZT2BQ6NZ67 158 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 BHLHB9Q6PI77 547 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 LRFN4Q6PJG9 635 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 LIPIQ6XZB0 460 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ETV3LQ6ZN32 361 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PRSS48Q7RTY5 328 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 FJX1Q86VR8 437 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 DGKHQ86XP1 1220 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 CPXCR1Q8N123 301 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF276Q8N554 614 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 TMEM102Q8N9M5 508 aaPredicted RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 POC5Q8NA72 575 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 FBXO27Q8NI29 283 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ZFP90Q8TF47 636 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 HTRA1Q92743 480 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 FAM117AQ9C073 453 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 SPNS1Q9H2V7 528 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 FOXP1Q9H334 677 aaPredicted RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 UNKLQ9H9P5 680 aaKnown RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 LRRC4Q9HBW1 653 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ZFP14Q9HCL3 533 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 OLA1Q9NTK5 396 aaKnown RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 CCM2LQ9NUG4 571 aaPredicted RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 DCTN4Q9UJW0 460 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 SAMHD1Q9Y3Z3 626 aaKnown RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PCDHGB7Q9Y5F8 929 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ARFGEF2Q9Y6D5 1785 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 FAM205CA6NFA0 338 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 SAC3D1A6NKF1 404 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 EFCAB7A8K855 629 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 AP3D1O14617 1153 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 SGCEO43556 437 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 CHMP2AO43633 222 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 CST8O60676 142 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 RASAL1O95294 804 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 MT-ND3P03897 115 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 ACAA1P09110 424 aaPredicted RBP8.86□□□□□ -0.99
COMMD3-215ENST00000602574 CAPN3P20807 821 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 IL1R2P27930 398 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 CPA2P48052 419 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 RPIAP49247 311 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 CDH6P55285 790 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 CDH15P55291 814 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 PTPN11Q06124 597 aaPredicted RBP8.86□□□□□ -0.99
COMMD3-215ENST00000602574 DMP1Q13316 513 aaPredicted RBP8.86□□□□□ -0.99
COMMD3-215ENST00000602574 KYAT1Q16773 422 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 PPP1R3AQ16821 1122 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 DGUOKQ16854 277 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 BMT2Q1RMZ1 405 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 GPR33Q49SQ1 333 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 GPR158Q5T848 1215 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 RHBDF2Q6PJF5 856 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 TAC4Q86UU9 113 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 PDIK1LQ8N165 341 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 NIPA2Q8N8Q9 360 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 MFSD2AQ8NA29 543 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 TTC29Q8NA56 475 aaPredicted RBP8.86□□□□□ -0.99
COMMD3-215ENST00000602574 TSPEARQ8WU66 669 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 DEDD2Q8WXF8 326 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 UPF1Q92900 1129 aaKnown RBP eCLIP8.86□□□□□ -0.99
COMMD3-215ENST00000602574 SLCO2A1Q92959 643 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 PPWD1Q96BP3 646 aaKnown RBP8.86□□□□□ -0.99
COMMD3-215ENST00000602574 ELP4Q96EB1 424 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF668Q96K58 619 aaPredicted RBP8.86□□□□□ -0.99
COMMD3-215ENST00000602574 PPP3R2Q96LZ3 170 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 UCK2Q9BZX2 261 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 TRIM31Q9BZY9 425 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 NAA50Q9GZZ1 169 aaKnown RBP8.86□□□□□ -0.99
COMMD3-215ENST00000602574 SYNDIG1Q9H7V2 258 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 GORASP2Q9H8Y8 452 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 C19orf12Q9NSK7 152 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 EXD2Q9NVH0 621 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 DNAJC11Q9NVH1 559 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 ACTR10Q9NZ32 417 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF224Q9NZL3 707 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 RCOR3Q9P2K3 495 aaPredicted RBP8.86□□□□□ -0.99
COMMD3-215ENST00000602574 NDRG3Q9UGV2 375 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 BTNL2Q9UIR0 455 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 TMPRSS11EQ9UL52 423 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 TIAM2Q8IVF5 1701 aa8.86□□□□□ -0.99
COMMD3-215ENST00000602574 MROH6A6NGR9 719 aa8.85□□□□□ -0.99
COMMD3-215ENST00000602574 HSBP1L1C9JCN9 74 aa8.85□□□□□ -0.99
COMMD3-215ENST00000602574 SOCS5O75159 536 aa8.85□□□□□ -0.99
COMMD3-215ENST00000602574 UGT2B17O75795 530 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms