RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MZB1Q8WU39 189 aa22.52■■□□□ 1.2
IRF3-228ENST00000601291 PLEKHG4BQ96PX9 1271 aa22.52■■□□□ 1.2
IRF3-228ENST00000601291 MARCH4Q9P2E8 410 aaPredicted RBP22.52■■□□□ 1.2
IRF3-228ENST00000601291 MMP17Q9ULZ9 603 aa22.52■■□□□ 1.2
IRF3-228ENST00000601291 PSMD11O00231 422 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 NEMP1O14524 444 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 AREL1O15033 823 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 SRP72O76094 671 aaKnown RBP22.51■■□□□ 1.19
IRF3-228ENST00000601291 PRAMEF1O95521 474 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 AHSGP02765 367 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 DNTTP04053 509 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 ITGALP20701 1170 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 COL9A1P20849 921 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 LEPRP48357 1165 aaKnown RBP22.51■■□□□ 1.19
IRF3-228ENST00000601291 SPINT3P49223 89 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 FAM151BQ6UXP7 276 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 EXOC3L1Q86VI1 746 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 ZC3HC1Q86WB0 502 aaKnown RBP22.51■■□□□ 1.19
IRF3-228ENST00000601291 ATXN2LQ8WWM7 1075 aaKnown RBP22.51■■□□□ 1.19
IRF3-228ENST00000601291 ATXN7L3BQ96GX2 97 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 VPS39Q96JC1 886 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 SMC6Q96SB8 1091 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 MCMBPQ9BTE3 642 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 FBXO6Q9NRD1 293 aaPredicted RBP22.51■■□□□ 1.19
IRF3-228ENST00000601291 SCML1Q9UN30 329 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 ITM2BQ9Y287 266 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 VPS9D1Q9Y2B5 631 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 UNC80Q8N2C7 3258 aa22.51■■□□□ 1.19
IRF3-228ENST00000601291 PLK4O00444 970 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 HPDP32754 393 aaPredicted RBP22.5■■□□□ 1.19
IRF3-228ENST00000601291 TYSND1Q2T9J0 566 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 PIP5KL1Q5T9C9 394 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 RNF187Q5TA31 235 aaPredicted RBP22.5■■□□□ 1.19
IRF3-228ENST00000601291 MICALCLQ6ZW33 695 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 TMPRSS6Q8IU80 811 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 RAVER1Q8IY67 606 aaKnown RBP22.5■■□□□ 1.19
IRF3-228ENST00000601291 FAM76AQ8TAV0 307 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 TCF12Q99081 682 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 MKRN2Q9H000 416 aaKnown RBP22.5■■□□□ 1.19
IRF3-228ENST00000601291 CDH19Q9H159 772 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 IL26Q9NPH9 171 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 INTS10Q9NVR2 710 aaKnown RBP22.5■■□□□ 1.19
IRF3-228ENST00000601291 RGSL1A5PLK6 1076 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 F7P08709 466 aaPredicted RBP22.5■■□□□ 1.19
IRF3-228ENST00000601291 CHRNB1P11230 501 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 NR1D1P20393 614 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 DRD3P35462 400 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 PPARGP37231 505 aaPredicted RBP22.5■■□□□ 1.19
IRF3-228ENST00000601291 TTPAP49638 278 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 STARD6P59095 220 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 ZBTB16Q05516 673 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 TTC31Q49AM3 519 aaPredicted RBP22.5■■□□□ 1.19
IRF3-228ENST00000601291 TMEM52BQ4KMG9 183 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 LIPIQ6XZB0 460 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 HSD11B1LQ7Z5J1 315 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 SNX20Q7Z614 316 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 HDDC3Q8N4P3 179 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 AADATQ8N5Z0 425 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 GPR26Q8NDV2 337 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 TTC1Q99614 292 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 OMDQ99983 421 aa22.5■■□□□ 1.19
IRF3-228ENST00000601291 A0A1W2PPM1 405 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 KANSL1LA0AUZ9 987 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 HMX2A2RU54 273 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 FOXO6A8MYZ6 492 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 SPINT1O43278 529 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 RNASEH2AO75792 299 aaKnown RBP22.49■■□□□ 1.19
IRF3-228ENST00000601291 HAUS5O94927 633 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 S1PR4O95977 384 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 GABRB3P28472 473 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 LIG3P49916 1009 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 CLCN5P51795 746 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 DCDC1P59894 354 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 SFSWAPQ12872 951 aaKnown RBP22.49■■□□□ 1.19
IRF3-228ENST00000601291 SEMA3AQ14563 771 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 UBXN2BQ14CS0 331 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 ACOX1Q15067 660 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 AGBL4Q5VU57 503 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 PSAPL1Q6NUJ1 521 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 CERS6Q6ZMG9 384 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 TIFABQ6ZNK6 161 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 TAS2R42Q7RTR8 314 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 LDB1Q86U70 411 aaPredicted RBP22.49■■□□□ 1.19
IRF3-228ENST00000601291 ARFGAP2Q8N6H7 521 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 CXorf40AQ8TE69 158 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 NELL2Q99435 816 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 GPR22Q99680 433 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 WRAP53Q9BUR4 548 aaKnown RBP22.49■■□□□ 1.19
IRF3-228ENST00000601291 ASB8Q9H765 288 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 CD248Q9HCU0 757 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 LTB4R2Q9NPC1 389 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 FADS3Q9Y5Q0 445 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 SCN8AQ9UQD0 1980 aa22.49■■□□□ 1.19
IRF3-228ENST00000601291 ZNF106Q9H2Y7 1883 aaKnown RBP22.48■■□□□ 1.19
IRF3-228ENST00000601291 A0A1W2PP55 124 aa22.48■■□□□ 1.19
IRF3-228ENST00000601291 KRBA1A5PL33 1030 aa22.48■■□□□ 1.19
IRF3-228ENST00000601291 AP1G1O43747 822 aa22.48■■□□□ 1.19
IRF3-228ENST00000601291 NDUFS3O75489 264 aa22.48■■□□□ 1.19
IRF3-228ENST00000601291 BRAFP15056 766 aa22.48■■□□□ 1.19
IRF3-228ENST00000601291 KRT4P19013 534 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms