RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PLOD2O00469 737 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 SOCS2O14508 198 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 RPP40O75818 363 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 FGF4P08620 206 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 ZBTB49Q6ZSB9 765 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 RAB44Q7Z6P3 723 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 DCP1BQ8IZD4 617 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 MIER2Q8N344 545 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 DDI1Q8WTU0 396 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 TUBGCP3Q96CW5 907 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 CATSPERZQ9NTU4 200 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 MARCH2Q9P0N8 246 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 AURKCQ9UQB9 309 aa20.18■□□□□ 0.82
SHKBP1-225ENST00000600733 H3BSA7 217 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 HTRA2O43464 458 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 CLASP2O75122 1294 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 OAZ2O95190 189 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 STAMBPO95630 424 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 ASGR1P07306 291 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 CYBAP13498 195 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 PAX3P23760 479 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 PBX3P40426 434 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 SUOXP51687 545 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 SH3BGRP55822 239 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 ECT2LQ008S8 904 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 TNK2Q07912 1038 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 ZNF235Q14590 738 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 C10orf120Q5SQS8 335 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 KANK2Q63ZY3 851 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 OR4L1Q8NH43 312 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 C8orf48Q96LL4 319 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 POLG2Q9UHN1 485 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 IKZF3Q9UKT9 509 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 FAM50BQ9Y247 325 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 ANKRD12Q6UB98 2062 aa20.17■□□□□ 0.82
SHKBP1-225ENST00000600733 UBA6A0AVT1 1052 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 ANKRD33BA6NCL7 494 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 BBIP1A8MTZ0 92 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 FXYD1O00168 92 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 ANGPT2O15123 496 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 ASLP04424 464 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 FGF1P05230 155 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 HGFP14210 728 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 UGT1A6P19224 532 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 HLA-DPA1P20036 260 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 PCSK6P29122 969 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 OR1G1P47890 313 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 STC1P52823 247 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 HUNKP57058 714 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 PRKCQQ04759 706 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 TRIP4Q15650 581 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 SPPL2CQ8IUH8 684 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 SLC15A3Q8IY34 581 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 GPR150Q8NGU9 434 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 DIS3LQ8TF46 1054 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 FBXO32Q969P5 355 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 FEM1CQ96JP0 617 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 CCT7Q99832 543 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 AARSD1Q9BTE6 412 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 CAAP1Q9H8G2 361 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 TRMT13Q9NUP7 481 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 DUS2Q9NX74 493 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 ABCD2Q9UBJ2 740 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 PADI4Q9UM07 663 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 SLC12A8A0AV02 714 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 SAC3D1A6NKF1 404 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 H6PDO95479 791 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 EEF1DP29692 281 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 RPS6KA3P51812 740 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 LAMB3Q13751 1172 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 PARP15Q460N3 678 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 KRT80Q6KB66 452 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 CFAP52Q8N1V2 620 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 BRSK1Q8TDC3 778 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 FUBP3Q96I24 572 aaKnown RBP eCLIP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 ASB2Q96Q27 587 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 SPC25Q9HBM1 224 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 SEMA4BQ9NPR2 832 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 OLAHQ9NV23 265 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 ARMC1Q9NVT9 282 aa20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.16■□□□□ 0.82
SHKBP1-225ENST00000600733 FAM149AA5PLN7 773 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 DRGXA6NNA5 263 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 SUPT3HB4E1H0 165 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 PRAMEF11O60813 436 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 SUPT3HO75486 399 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 DIO3P55073 304 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 NFE2Q16621 373 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 CST9Q5W186 159 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 PAQR3Q6TCH7 311 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 ERMP1Q7Z2K6 904 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 ANKFN1Q8N957 763 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 RHEBL1Q8TAI7 183 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 B3GALT6Q96L58 329 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 CMTM6Q9NX76 183 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 NOD1Q9Y239 953 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 NDUFAF1Q9Y375 327 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 A0A0D9SEW6 157 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 TPST1O60507 370 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 BMP2P12643 396 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms