RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SRP54P61011 504 aaKnown RBP8.76□□□□□ -1.01
SSBP4-208ENST00000600628 CDK3Q00526 305 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 ITKQ08881 620 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 DNAJC3Q13217 504 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 MPP3Q13368 585 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 ACOX1Q15067 660 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 ST3GAL2Q16842 350 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 PRRT3Q5FWE3 981 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 CDCP2Q5VXM1 449 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 DENND5AQ6IQ26 1287 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 ZCCHC8Q6NZY4 707 aaKnown RBP8.76□□□□□ -1.01
SSBP4-208ENST00000600628 C17orf82Q86X59 251 aaPredicted RBP8.76□□□□□ -1.01
SSBP4-208ENST00000600628 CCDC50Q8IVM0 306 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 NDUFAF2Q8N183 169 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 FSTL5Q8N475 847 aaPredicted RBP8.76□□□□□ -1.01
SSBP4-208ENST00000600628 TTC30BQ8N4P2 665 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 UBL4BQ8N7F7 174 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 KDF1Q8NAX2 398 aaPredicted RBP8.76□□□□□ -1.01
SSBP4-208ENST00000600628 GPBAR1Q8TDU6 330 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 PTCD2Q8WV60 388 aaKnown RBP8.76□□□□□ -1.01
SSBP4-208ENST00000600628 SCAMP4Q969E2 229 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 PDXPQ96GD0 296 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 APOLD1Q96LR9 279 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 AGAP2Q99490 1192 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 MLPHQ9BV36 600 aaPredicted RBP8.76□□□□□ -1.01
SSBP4-208ENST00000600628 DUSP23Q9BVJ7 150 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 TLR10Q9BXR5 811 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 ADGRE3Q9BY15 652 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 CDH19Q9H159 772 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 GBA3Q9H227 469 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 CARD9Q9H257 536 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 WDR26Q9H7D7 661 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 SPASTQ9UBP0 616 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 FAM153AQ9UHL3 310 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 R3HDM2Q9Y2K5 976 aaKnown RBP8.76□□□□□ -1.01
SSBP4-208ENST00000600628 SPO11Q9Y5K1 396 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 MGAQ8IWI9 3026 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 KIF26BQ2KJY2 2108 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 SMG1Q96Q15 3661 aaKnown RBP8.75□□□□□ -1.01
SSBP4-208ENST00000600628 C1orf232A0A0U1RR37 186 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 PRSS38A1L453 326 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 EME2A4GXA9 379 aaPredicted RBP8.75□□□□□ -1.01
SSBP4-208ENST00000600628 FADS2P1A8MWK0 482 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 H3BM21 787 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 GAPDHSO14556 408 aaPredicted RBP8.75□□□□□ -1.01
SSBP4-208ENST00000600628 AURKAO14965 403 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 YY2O15391 372 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 NEBLO76041 1014 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 PCCBP05166 539 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 PYGLP06737 847 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 IVLP07476 585 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 CELA2BP08218 269 aaPredicted RBP8.75□□□□□ -1.01
SSBP4-208ENST00000600628 CCDC175P0C221 793 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 HTR1BP28222 390 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 BLKP51451 505 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 WNT3AP56704 352 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 EIF3EP60228 445 aaKnown RBP8.75□□□□□ -1.01
SSBP4-208ENST00000600628 PPARDQ03181 441 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 ARHGEF7Q14155 803 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 GALNT3Q14435 633 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 SLC1A5Q15758 541 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 CCDC157Q569K6 752 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 ODF2Q5BJF6 829 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 SIRPB2Q5JXA9 342 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 ANKRD20A2Q5SQ80 823 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 C6orf132Q5T0Z8 1188 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 ANKRD20A1Q5TYW2 823 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 ANKRD20A3Q5VUR7 823 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 DHRS13Q6UX07 377 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 LYSMD3Q7Z3D4 306 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 HEATR4Q86WZ0 1026 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 NRROSQ86YC3 692 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 REXO1L1PQ8IX06 675 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 GALNT15Q8N3T1 639 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 GPR26Q8NDV2 337 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 LPCAT1Q8NF37 534 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 GPR156Q8NFN8 814 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 OR56A4Q8NGH8 313 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 TSACCQ96A04 125 aaPredicted RBP8.75□□□□□ -1.01
SSBP4-208ENST00000600628 HAUS1Q96CS2 278 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 SRPK1Q96SB4 655 aaKnown RBP8.75□□□□□ -1.01
SSBP4-208ENST00000600628 KCNF1Q9H3M0 494 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 TRABDQ9H4I3 376 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 C10orf88Q9H8K7 445 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 ZFYVE1Q9HBF4 777 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 TRNAU1APQ9NX07 287 aaKnown RBP8.75□□□□□ -1.01
SSBP4-208ENST00000600628 IL17CQ9P0M4 197 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 DKK4Q9UBT3 224 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 APOBEC3BQ9UH17 382 aaKnown RBP8.75□□□□□ -1.01
SSBP4-208ENST00000600628 TMPRSS11EQ9UL52 423 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 GUCA1BQ9UMX6 200 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 PPP2R2CQ9Y2T4 447 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 ATMQ13315 3056 aa8.75□□□□□ -1.01
SSBP4-208ENST00000600628 TMEM8BA6NDV4 472 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 AGAP14A8MT82 685 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 PDE2AO00408 941 aaPredicted RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 FFAR2O15552 330 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 NOBOXO60393 691 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 DNAJC6O75061 913 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 RFPL3O75679 317 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms