RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CDC23Q9UJX2 597 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 TMPRSS11EQ9UL52 423 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 OR1A2Q9Y585 309 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 LRP4O75096 1905 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 FADS2P1A8MWK0 482 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 TP73O15350 636 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 FOXD2O60548 495 aaPredicted RBP13.69□□□□□ -0.22
VRK3-219ENST00000600137 PCCBP05166 539 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 APRTP07741 180 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 SYPP08247 313 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 TPSB2P20231 275 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 VPS41P49754 854 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 DCDC1P59894 354 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 TAF1AQ15573 450 aaPredicted RBP13.69□□□□□ -0.22
VRK3-219ENST00000600137 TPSAB1Q15661 275 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 CERCAMQ5T4B2 595 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 MICALCLQ6ZW33 695 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 KANSL1Q7Z3B3 1105 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 LINC00523Q86TU6 105 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 DCP2Q8IU60 420 aaKnown RBP13.69□□□□□ -0.22
VRK3-219ENST00000600137 KLHL7Q8IXQ5 586 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 MINDY1Q8N5J2 469 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 CCHCR1Q8TD31 782 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 DTX3LQ8TDB6 740 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 AP2M1Q96CW1 435 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 COX14Q96I36 57 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 EDEM2Q9BV94 578 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 FAM83DQ9H4H8 585 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 GAREM1Q9H706 876 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 BPIFA1Q9NP55 256 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 IL26Q9NPH9 171 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 FNDC3AQ9Y2H6 1198 aaKnown RBP13.69□□□□□ -0.22
VRK3-219ENST00000600137 ARL5AQ9Y689 179 aa13.69□□□□□ -0.22
VRK3-219ENST00000600137 ZNF106Q9H2Y7 1883 aaKnown RBP13.68□□□□□ -0.22
VRK3-219ENST00000600137 A0A1B0GTQ1 180 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 GOLGA6CA6NDK9 693 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 GOLGA6BA6NDN3 693 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 TMEM202A6NGA9 273 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 MROH6A6NGR9 719 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 PCNX2A6NKB5 2137 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 C4orf47A7E2U8 309 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 TMEM63AO94886 807 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 ECEL1O95672 775 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 GOLGA6DP0CG33 693 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 TSHRP16473 764 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 ZNF140P52738 457 aaPredicted RBP13.68□□□□□ -0.22
VRK3-219ENST00000600137 LIMK1P53667 647 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 C21orf59P57076 290 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 BASP1P80723 227 aaKnown RBP13.68□□□□□ -0.22
VRK3-219ENST00000600137 XIAPP98170 497 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 CDK16Q00536 496 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 CDH17Q12864 832 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 BNIP3Q12983 259 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 PTK6Q13882 451 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 PDE1CQ14123 709 aaPredicted RBP13.68□□□□□ -0.22
VRK3-219ENST00000600137 STPG1Q5TH74 334 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 ADAMTSL4Q6UY14 1074 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 GLT6D1Q7Z4J2 308 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 PTAR1Q7Z6K3 402 aaPredicted RBP13.68□□□□□ -0.22
VRK3-219ENST00000600137 CAND1Q86VP6 1230 aaKnown RBP13.68□□□□□ -0.22
VRK3-219ENST00000600137 NAT8LQ8N9F0 302 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 OR13C4Q8NGS5 318 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 GRK7Q8WTQ7 553 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
VRK3-219ENST00000600137 ELF4Q99607 663 aaPredicted RBP13.68□□□□□ -0.22
VRK3-219ENST00000600137 C19orf43Q9BQ61 176 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 GTPBP2Q9BX10 602 aaKnown RBP13.68□□□□□ -0.22
VRK3-219ENST00000600137 GDF3Q9NR23 364 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 GOLGA6AQ9NYA3 693 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 PKD2L2Q9NZM6 624 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 PLXNB3Q9ULL4 1909 aa13.68□□□□□ -0.22
VRK3-219ENST00000600137 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.67□□□□□ -0.22
VRK3-219ENST00000600137 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
VRK3-219ENST00000600137 TTI1O43156 1089 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 MAGEC1O60732 1142 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 URI1O94763 535 aaPredicted RBP13.67□□□□□ -0.22
VRK3-219ENST00000600137 GAS8O95995 478 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 CEACAM5P06731 702 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 ZNF883P0CG24 379 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 GIMD1P0DJR0 217 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 CD59P13987 128 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 LPOP22079 712 aaPredicted RBP13.67□□□□□ -0.22
VRK3-219ENST00000600137 KIAA1024LP59773 190 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 CDK3Q00526 305 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 NFATC4Q14934 902 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 AASDHQ4L235 1098 aaPredicted RBP13.67□□□□□ -0.22
VRK3-219ENST00000600137 ZNF542PQ5EBM4 170 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 IL27RAQ6UWB1 636 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 MACC1Q6ZN28 852 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 HEATR4Q86WZ0 1026 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 JAMLQ86YT9 394 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 OR4K2Q8NGD2 314 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 SKA1Q96BD8 255 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 ZNF778Q96MU6 729 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 PLEKHG4BQ96PX9 1271 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 KRT12Q99456 494 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 FRMD8Q9BZ67 464 aaPredicted RBP13.67□□□□□ -0.22
VRK3-219ENST00000600137 CDH19Q9H159 772 aa13.67□□□□□ -0.22
VRK3-219ENST00000600137 TCEAL2Q9H3H9 227 aaPredicted RBP13.67□□□□□ -0.22
VRK3-219ENST00000600137 TMEM9BQ9NQ34 198 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms