RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 GEMIN4P57678 1058 aaKnown RBP13.74□□□□□ -0.21
IRF3-225ENST00000600022 CYP4F2P78329 520 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 SERINC3Q13530 473 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 ELOCQ15369 112 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 UGP2Q16851 508 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 INO80DQ53TQ3 878 aaPredicted RBP13.74□□□□□ -0.21
IRF3-225ENST00000600022 ZFAND4Q86XD8 727 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 VSIG1Q86XK7 387 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 SLC13A5Q86YT5 568 aaPredicted RBP13.74□□□□□ -0.21
IRF3-225ENST00000600022 PSTKQ8IV42 348 aaKnown RBP13.74□□□□□ -0.21
IRF3-225ENST00000600022 NOA1Q8NC60 698 aaKnown RBP13.74□□□□□ -0.21
IRF3-225ENST00000600022 EXTL1Q92935 676 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 NTAN1Q96AB6 310 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 LIN37Q96GY3 246 aaPredicted RBP13.74□□□□□ -0.21
IRF3-225ENST00000600022 TBATAQ96M53 351 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 GFM1Q96RP9 751 aaKnown RBP13.74□□□□□ -0.21
IRF3-225ENST00000600022 LGR4Q9BXB1 951 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 TRIM4Q9C037 500 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 LRRN3Q9H3W5 708 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 SUV39H2Q9H5I1 410 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 GPATCH2LQ9NWQ4 482 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 PISDQ9UG56 409 aa13.74□□□□□ -0.21
IRF3-225ENST00000600022 UBR5O95071 2799 aaPredicted RBP13.73□□□□□ -0.21
IRF3-225ENST00000600022 TTC24A2A3L6 582 aaPredicted RBP13.73□□□□□ -0.21
IRF3-225ENST00000600022 TJP3O95049 919 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 RARAP10276 462 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 GM2AP17900 193 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 ARSEP51690 589 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 INHBCP55103 352 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 NFATC3Q12968 1075 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 NFATC4Q14934 902 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 TAZQ16635 292 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 MAP9Q49MG5 647 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 BOLA3Q53S33 107 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 VASH2Q86V25 355 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 MAP7D3Q8IWC1 876 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 KLHL7Q8IXQ5 586 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 FSTL5Q8N475 847 aaPredicted RBP13.73□□□□□ -0.21
IRF3-225ENST00000600022 KCTD6Q8NC69 237 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 GPR156Q8NFN8 814 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 CCDC97Q96F63 343 aaPredicted RBP13.73□□□□□ -0.21
IRF3-225ENST00000600022 CELF6Q96J87 481 aaKnown RBP13.73□□□□□ -0.21
IRF3-225ENST00000600022 KRT12Q99456 494 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 SNRNP25Q9BV90 132 aaKnown RBP13.73□□□□□ -0.21
IRF3-225ENST00000600022 AP1M1Q9BXS5 423 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 ZWILCHQ9H900 591 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 PDFQ9HBH1 243 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 FGF22Q9HCT0 170 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 SMARCAL1Q9NZC9 954 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 PCSK1NQ9UHG2 260 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 FZD10Q9ULW2 581 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 UNC13CQ8NB66 2214 aa13.73□□□□□ -0.21
IRF3-225ENST00000600022 TLN1Q9Y490 2541 aaKnown RBP13.72□□□□□ -0.21
IRF3-225ENST00000600022 FLNCQ14315 2725 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 PRAMEF33A0A0G2JMD5 474 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 TSPAN11A1L157 253 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 LRRD1A4D1F6 860 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 ZSCAN5CA6NGD5 496 aaPredicted RBP13.72□□□□□ -0.21
IRF3-225ENST00000600022 CAPN8A6NHC0 703 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 C3orf70A6NLC5 250 aaPredicted RBP13.72□□□□□ -0.21
IRF3-225ENST00000600022 ZNF487B1APH4 448 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 PRAMEF10O60809 474 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 RASGRP1O95267 797 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 FUCA1P04066 466 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 ITGB6P18564 788 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 XPAP23025 273 aaPredicted RBP13.72□□□□□ -0.21
IRF3-225ENST00000600022 KCNC4Q03721 635 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 RAD51Q06609 339 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 RALGDSQ12967 914 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 BRD3Q15059 726 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 DPYSL2Q16555 572 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 CA9Q16790 459 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 OGFOD3Q6PK18 319 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 LVRNQ6Q4G3 990 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 ARHGAP36Q6ZRI8 547 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 PRICKLE2Q7Z3G6 844 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 TP53INP2Q8IXH6 220 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 UMODL1-AS1Q8N2C9 162 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 TSEN2Q8NCE0 465 aaKnown RBP13.72□□□□□ -0.21
IRF3-225ENST00000600022 FAM46DQ8NEK8 389 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 FAM71BQ8TC56 605 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 PTCD2Q8WV60 388 aaKnown RBP13.72□□□□□ -0.21
IRF3-225ENST00000600022 RAPGEF5Q92565 580 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 RBM15Q96T37 977 aaKnown RBP eCLIP13.72□□□□□ -0.21
IRF3-225ENST00000600022 C1QTNF7Q9BXJ2 289 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 MAK16Q9BXY0 300 aaKnown RBP13.72□□□□□ -0.21
IRF3-225ENST00000600022 OSBPL8Q9BZF1 889 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 SLC39A8Q9C0K1 460 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 TMEM168Q9H0V1 697 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 SEMA6CQ9H3T2 930 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 CLMPQ9H6B4 373 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 RETREG1Q9H6L5 497 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 LRRC19Q9H756 370 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.72□□□□□ -0.21
IRF3-225ENST00000600022 FOXJ2Q9P0K8 574 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 KLQ9UEF7 1012 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 FEZ2Q9UHY8 353 aaPredicted RBP13.72□□□□□ -0.21
IRF3-225ENST00000600022 PCDHGA7Q9Y5G6 932 aa13.72□□□□□ -0.21
IRF3-225ENST00000600022 RNF215Q9Y6U7 377 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms