RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 PPP2R5EQ16537 467 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 FBXL22Q6P050 247 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 AADACL2Q6P093 401 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 SPOCD1Q6ZMY3 1216 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 RASGEF1CQ8N431 466 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 ATP11CQ8NB49 1132 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 RCBTB1Q8NDN9 531 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 SCG3Q8WXD2 468 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 PPP1R16AQ96I34 528 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 HDAC8Q9BY41 377 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 SIK2Q9H0K1 926 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 TTC7AQ9ULT0 858 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 ITM2BQ9Y287 266 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 SAR1BQ9Y6B6 198 aa13.96□□□□□ -0.17
SHKBP1-218ENST00000598907 hCG_1818297A0A087WSY0 165 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 WASH4PA8MWX3 477 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 OAS2P29728 719 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 CXCR5P32302 372 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 DNA2P51530 1060 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 IRAK1P51617 712 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 PLK1P53350 603 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 PPARDQ03181 441 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 MMRN1Q13201 1228 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 SEPT6Q14141 434 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 PTK2BQ14289 1009 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 ANKRD20A8PQ5CZ79 823 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 TFDP3Q5H9I0 405 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 PPP6R3Q5H9R7 873 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 ATP1A1-AS1Q5TC04 95 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 RD3Q7Z3Z2 195 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 HID1Q8IV36 788 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 SLITRK4Q8IW52 837 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 GALNT11Q8NCW6 608 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 TMIEQ8NEW7 156 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 KIF18AQ8NI77 898 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 GPBAR1Q8TDU6 330 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 COG1Q8WTW3 980 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 APOBEC4Q8WW27 367 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 FEM1CQ96JP0 617 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 CSPG4P5Q96PW8 444 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 RNF157Q96PX1 679 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 PSMB7Q99436 277 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 EPAS1Q99814 870 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 HERPUD2Q9BSE4 406 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 FEM1AQ9BSK4 669 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 RETREG1Q9H6L5 497 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 RDH14Q9HBH5 336 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 AKAP7Q9P0M2 348 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 ZNF212Q9UDV6 495 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 IL36AQ9UHA7 158 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 VANGL2Q9ULK5 521 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 FADS3Q9Y5Q0 445 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 MED13Q9UHV7 2174 aa13.95□□□□□ -0.18
SHKBP1-218ENST00000598907 TTLL8A6PVC2 850 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 H3BRJ5 948 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 EEF2KO00418 725 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 CREB3O43889 395 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 SNAP91O60641 907 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 RAD1O60671 282 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 SRGAP2O75044 1071 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 LEFTY1O75610 366 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 CTSEP14091 401 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 GRNP28799 593 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 IGFALSP35858 605 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 ARL4AP40617 200 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 ADCY2Q08462 1091 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 ELOCQ15369 112 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 RABGAP1LQ5R372 815 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 ZFYVE27Q5T4F4 411 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 C1QL3Q5VWW1 255 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 SLC9A4Q6AI14 798 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 LRRC31Q6UY01 552 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 RFX8Q6ZV50 586 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 SPRED1Q7Z699 444 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 NLRP14Q86W24 1093 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 CREG2Q8IUH2 290 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 FSTL5Q8N475 847 aaPredicted RBP13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 PQLC3Q8N755 202 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 ACTRT1Q8TDG2 376 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 TSACCQ96A04 125 aaPredicted RBP13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 TBC1D31Q96DN5 1066 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 ALG14Q96F25 216 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 TBATAQ96M53 351 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 OSBPL8Q9BZF1 889 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 MUC3BQ9H195 1237 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 GPN2Q9H9Y4 310 aaPredicted RBP13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 PRDM8Q9NQV8 689 aa13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 CUEDC1Q9NWM3 386 aaPredicted RBP13.94□□□□□ -0.18
SHKBP1-218ENST00000598907 UNC13CQ8NB66 2214 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 NEMP1O14524 444 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 ZNF185O15231 689 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 FGF10O15520 208 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 SMAD6O43541 496 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 ALPIP09923 528 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 RHOQP17081 205 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 ERCC2P18074 760 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 AMPD1P23109 780 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 ITGB7P26010 798 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 RECQLP46063 649 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms