RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 MTERF4Q7Z6M4 381 aaKnown RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 KBTBD6Q86V97 674 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 AADATQ8N5Z0 425 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 GPR150Q8NGU9 434 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 DCAKDQ8WVC6 231 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 EDAQ92838 391 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 PLEKHG4BQ96PX9 1271 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 TTC1Q99614 292 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 MKRN2Q9H000 416 aaKnown RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 TMBIM4Q9HC24 238 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 FBXL12Q9NXK8 326 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 BCCIPQ9P287 314 aaKnown RBP eCLIP15.42■□□□□ 0.06
UPF1-206ENST00000598471 FNDC3AQ9Y2H6 1198 aaKnown RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 GLYATL1P3A0A0U1RQE8 302 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 A0A0U1RQS6 177 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 A0A1W2PP55 124 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 PLK4O00444 970 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 TSPAN6O43657 245 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 PIAS1O75925 651 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 C7P10643 843 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 BPIP17213 487 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 GCAP28676 217 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 PMLP29590 882 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 SPRP35270 261 aaPredicted RBP15.41■□□□□ 0.06
UPF1-206ENST00000598471 SLC1A2P43004 574 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 SPINT3P49223 89 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 LIG3P49916 1009 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 DCDC1P59894 354 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 PTSQ03393 145 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 CACNG1Q06432 222 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 ACOX1Q15067 660 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 ZRANB3Q5FWF4 1079 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 AGBL4Q5VU57 503 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 TMEM92Q6UXU6 159 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 LIPIQ6XZB0 460 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 USP30Q70CQ3 517 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 STRA8Q7Z7C7 330 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 NRSN1Q8IZ57 195 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 C2CD4AQ8NCU7 369 aaPredicted RBP15.41■□□□□ 0.06
UPF1-206ENST00000598471 EID2BQ96D98 161 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 MTBPQ96DY7 904 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 TCF12Q99081 682 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 AGAP2Q99490 1192 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 FOXQ1Q9C009 403 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 SUDS3Q9H7L9 328 aaPredicted RBP15.41■□□□□ 0.06
UPF1-206ENST00000598471 CD248Q9HCU0 757 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 KCTD5Q9NXV2 234 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 NFKBIL1Q9UBC1 381 aaPredicted RBP15.41■□□□□ 0.06
UPF1-206ENST00000598471 TBK1Q9UHD2 729 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 FBXO5Q9UKT4 447 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 FZD4Q9ULV1 537 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 ITM2BQ9Y287 266 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 VPS9D1Q9Y2B5 631 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 FADS3Q9Y5Q0 445 aa15.41■□□□□ 0.06
UPF1-206ENST00000598471 OR51F1A6NGY5 319 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 HMGB1P1B2RPK0 211 aaPredicted RBP15.4■□□□□ 0.06
UPF1-206ENST00000598471 PRAMEF1O95521 474 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
UPF1-206ENST00000598471 KRT15P19012 456 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 FOXN2P32314 431 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 CD151P48509 253 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 TTPAP49638 278 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 ZNF284Q2VY69 593 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 RNF187Q5TA31 235 aaPredicted RBP15.4■□□□□ 0.06
UPF1-206ENST00000598471 LYPLAL1Q5VWZ2 237 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 FAM151BQ6UXP7 276 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 TRIM67Q6ZTA4 783 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 HSD11B1LQ7Z5J1 315 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 SNX20Q7Z614 316 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 GALNT7Q86SF2 657 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 CILP2Q8IUL8 1156 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 FLCNQ8NFG4 579 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 PJA1Q8NG27 643 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 ZBTB9Q96C00 473 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 MRGPRX1Q96LB2 322 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 RBBP8Q99708 897 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 IER2Q9BTL4 223 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 WRAP53Q9BUR4 548 aaKnown RBP15.4■□□□□ 0.06
UPF1-206ENST00000598471 INTS10Q9NVR2 710 aaKnown RBP15.4■□□□□ 0.06
UPF1-206ENST00000598471 SLC17A6Q9P2U8 582 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 CTNNAL1Q9UBT7 734 aa15.4■□□□□ 0.06
UPF1-206ENST00000598471 MTF2Q9Y483 593 aaPredicted RBP15.4■□□□□ 0.06
UPF1-206ENST00000598471 WNT9AO14904 365 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 SPINT1O43278 529 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 LZTS3O60299 673 aaPredicted RBP15.39■□□□□ 0.05
UPF1-206ENST00000598471 UGT1A9O60656 530 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 SRP72O76094 671 aaKnown RBP15.39■□□□□ 0.05
UPF1-206ENST00000598471 PCDH8O95206 1070 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 SYF2O95926 243 aaKnown RBP15.39■□□□□ 0.05
UPF1-206ENST00000598471 NDUFV2P19404 249 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 XIAPP98170 497 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 CTBP1Q13363 440 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 PEX6Q13608 980 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 ITGA9Q13797 1035 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 GPR33Q49SQ1 333 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 CERS6Q6ZMG9 384 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 ZNF765Q7L2R6 523 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 TAS2R42Q7RTR8 314 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 CYP2U1Q7Z449 544 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 DENND6AQ8IWF6 608 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms