RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CEACAM1P13688 526 aa25.67■■□□□ 1.7
TRIM28-204ENST00000594806 PPARDQ03181 441 aa25.67■■□□□ 1.7
TRIM28-204ENST00000594806 HENMT1Q5T8I9 393 aaKnown RBP25.67■■□□□ 1.7
TRIM28-204ENST00000594806 RFLNAQ6ZTI6 216 aa25.67■■□□□ 1.7
TRIM28-204ENST00000594806 DTX3LQ8TDB6 740 aa25.67■■□□□ 1.7
TRIM28-204ENST00000594806 SCAMP4Q969E2 229 aa25.67■■□□□ 1.7
TRIM28-204ENST00000594806 C19orf43Q9BQ61 176 aa25.67■■□□□ 1.7
TRIM28-204ENST00000594806 CD84Q9UIB8 345 aa25.67■■□□□ 1.7
TRIM28-204ENST00000594806 NEMP2A6NFY4 417 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 K7ESM1 405 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 PIAS2O75928 621 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 JUNDP17535 347 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 CDK3Q00526 305 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 PDE1BQ01064 536 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 HS1BP3Q53T59 392 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 PDPK2PQ6A1A2 396 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 ENPP7Q6UWV6 458 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 KDM7AQ6ZMT4 941 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 GLT6D1Q7Z4J2 308 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 HEATR4Q86WZ0 1026 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 PDCD7Q8N8D1 485 aaKnown RBP25.66■■□□□ 1.7
TRIM28-204ENST00000594806 BRSK1Q8TDC3 778 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 BLOC1S5Q8TDH9 187 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 SETD7Q8WTS6 366 aaKnown RBP25.66■■□□□ 1.7
TRIM28-204ENST00000594806 PLEKHG4BQ96PX9 1271 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 CDC6Q99741 560 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 RIOK2Q9BVS4 552 aaKnown RBP25.66■■□□□ 1.7
TRIM28-204ENST00000594806 SLC13A1Q9BZW2 595 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 ETNK1Q9HBU6 452 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 RNF14Q9UBS8 474 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 KLQ9UEF7 1012 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 CSNK1G3Q9Y6M4 447 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 DMXL1Q9Y485 3027 aa25.66■■□□□ 1.7
TRIM28-204ENST00000594806 E7EVH7 732 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 SH3BP5O60239 455 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 RASGRP1O95267 797 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 DGKAP23743 735 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 KCNJ1P48048 391 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 IL9RQ01113 521 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 BNIP3Q12983 259 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 SEMA5AQ13591 1074 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 TAF1AQ15573 450 aaPredicted RBP25.65■■□□□ 1.7
TRIM28-204ENST00000594806 DENND5AQ6IQ26 1287 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 KANSL1Q7Z3B3 1105 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 PHACTR4Q8IZ21 702 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 PELI3Q8N2H9 469 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 TTC30BQ8N4P2 665 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 OR56A4Q8NGH8 313 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 RHBDD1Q8TEB9 315 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 ZSCAN5AQ9BUG6 496 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 AP1M1Q9BXS5 423 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 RAB6BQ9NRW1 208 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 SPASTQ9UBP0 616 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 PKP3Q9Y446 797 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 DGKBQ9Y6T7 804 aa25.65■■□□□ 1.7
TRIM28-204ENST00000594806 ARID1BQ8NFD5 2236 aaPredicted RBP25.64■■□□□ 1.7
TRIM28-204ENST00000594806 SCN8AQ9UQD0 1980 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 DCDC2BA2VCK2 349 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 C2orf81A6NN90 581 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 ZNF185O15231 689 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 SUN1O94901 812 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 CRTAMO95727 393 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 SOD1P00441 154 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 RPL22P35268 128 aaKnown RBP25.64■■□□□ 1.7
TRIM28-204ENST00000594806 FNTAP49354 379 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 HK3P52790 923 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 SRP54P61011 504 aaKnown RBP25.64■■□□□ 1.7
TRIM28-204ENST00000594806 FAXCQ5TGI0 409 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 GATAD2AQ86YP4 633 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 SDR16C5Q8N3Y7 309 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 TRAM1L1Q8N609 369 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 GRK7Q8WTQ7 553 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 HIC2Q96JB3 615 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 APOL2Q9BQE5 337 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 IL17CQ9P0M4 197 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 PCOLCE2Q9UKZ9 415 aa25.64■■□□□ 1.7
TRIM28-204ENST00000594806 AURKAO14965 403 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 CBFA2T3O75081 653 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 PHF2O75151 1096 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 KCNK5O95279 499 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 TNFP01375 233 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 ETS1P14921 441 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 LPOP22079 712 aaPredicted RBP25.63■■□□□ 1.69
TRIM28-204ENST00000594806 COILP38432 576 aaPredicted RBP25.63■■□□□ 1.69
TRIM28-204ENST00000594806 LMAN1P49257 510 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 ETF1P62495 437 aaKnown RBP25.63■■□□□ 1.69
TRIM28-204ENST00000594806 MSLNQ13421 630 aaPredicted RBP25.63■■□□□ 1.69
TRIM28-204ENST00000594806 SPARCL1Q14515 664 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 CCDC137Q6PK04 289 aaKnown RBP25.63■■□□□ 1.69
TRIM28-204ENST00000594806 DGLUCYQ7Z3D6 616 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 FSTL5Q8N475 847 aaPredicted RBP25.63■■□□□ 1.69
TRIM28-204ENST00000594806 GPR26Q8NDV2 337 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 DEFB124Q8NES8 71 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 LGR4Q9BXB1 951 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 EIF2B3Q9NR50 452 aaKnown RBP25.63■■□□□ 1.69
TRIM28-204ENST00000594806 APOBEC3BQ9UH17 382 aaKnown RBP25.63■■□□□ 1.69
TRIM28-204ENST00000594806 KLF15Q9UIH9 416 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 LRP4O75096 1905 aa25.63■■□□□ 1.69
TRIM28-204ENST00000594806 USP12O75317 370 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 GAS8O95995 478 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms