RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 BPIP17213 487 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 TIE1P35590 1138 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 MAGEA12P43365 314 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 PTSQ03393 145 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 E2F5Q15329 346 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 FASTKD1Q53R41 847 aaKnown RBP15.15■□□□□ 0.02
VRK3-207ENST00000594092 TMEM196Q5HYL7 178 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 CMC1Q7Z7K0 106 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 ARRDC3Q96B67 414 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 CCT8L2Q96SF2 557 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 FAM107BQ9H098 131 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 SNX15Q9NRS6 342 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 GAPDHSO14556 408 aaPredicted RBP15.14■□□□□ 0.01
VRK3-207ENST00000594092 EGFP01133 1207 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 IL1BP01584 269 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 XPAP23025 273 aaPredicted RBP15.14■□□□□ 0.01
VRK3-207ENST00000594092 ITGB7P26010 798 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 VIPR1P32241 457 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 CCT5P48643 541 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 CDKN1CP49918 316 aaPredicted RBP15.14■□□□□ 0.01
VRK3-207ENST00000594092 SERPINB8P50452 374 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 STC1P52823 247 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 TYSND1Q2T9J0 566 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 PSAPL1Q6NUJ1 521 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 DSG4Q86SJ6 1040 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 SDCCAG8Q86SQ7 713 aaPredicted RBP15.14■□□□□ 0.01
VRK3-207ENST00000594092 MMAAQ8IVH4 418 aaKnown RBP15.14■□□□□ 0.01
VRK3-207ENST00000594092 PIANPQ8IYJ0 282 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 CBARPQ8N350 705 aaPredicted RBP15.14■□□□□ 0.01
VRK3-207ENST00000594092 PBXIP1Q96AQ6 731 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 ERLEC1Q96DZ1 483 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 ZNF317Q96PQ6 595 aaPredicted RBP15.14■□□□□ 0.01
VRK3-207ENST00000594092 SLC13A1Q9BZW2 595 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 CAB39LQ9H9S4 337 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 SLC39A10Q9ULF5 831 aa15.14■□□□□ 0.01
VRK3-207ENST00000594092 FAM95CA0A1B0GW59 222 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 VIMP08670 466 aaKnown RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 C1SP09871 688 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 IL9P15248 144 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 NFKBIAP25963 317 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 PMLP29590 882 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 TYK2P29597 1187 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 PFKPQ01813 784 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 CAMK2GQ13555 558 aaPredicted RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 PDE1CQ14123 709 aaPredicted RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 ZRANB3Q5FWF4 1079 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 CPLX4Q7Z7G2 160 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 SCG3Q8WXD2 468 aaKnown RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 NSRP1Q9H0G5 558 aaKnown RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 FAM96AQ9H5X1 160 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 IL26Q9NPH9 171 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 SLC17A7Q9P2U7 560 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 ERICH4A6NGS2 130 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 ZNF30P17039 623 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 DRD1P21728 446 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 CRHR1P34998 444 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 SPAM1P38567 509 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 MMP12P39900 470 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 POLD2P49005 469 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 CSRP3P50461 194 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 CLCN5P51795 746 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 TFF2Q03403 129 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 CACNG1Q06432 222 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 GRSF1Q12849 480 aaKnown RBP eCLIP15.13■□□□□ 0.01
VRK3-207ENST00000594092 ARHGEF7Q14155 803 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 USP10Q14694 798 aaKnown RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 C2orf27AQ580R0 203 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 PPM1JQ5JR12 505 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 HABP4Q5JVS0 413 aaKnown RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 RBM20Q5T481 1227 aaKnown RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 FAM151BQ6UXP7 276 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 CDHR3Q6ZTQ4 885 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 DPPA4Q7L190 304 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 SLC41A1Q8IVJ1 513 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 GPATCH11Q8N954 259 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 GPR26Q8NDV2 337 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 ZNF473Q8WTR7 871 aaKnown RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 PPP1R16AQ96I34 528 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 ELMO2Q96JJ3 720 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 CABS1Q96KC9 395 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 FAM111AQ96PZ2 611 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 TCF12Q99081 682 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 C12orf65Q9H3J6 166 aaKnown RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 INTS10Q9NVR2 710 aaKnown RBP15.13■□□□□ 0.01
VRK3-207ENST00000594092 APPL1Q9UKG1 709 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 SLC30A1Q9Y6M5 507 aa15.13■□□□□ 0.01
VRK3-207ENST00000594092 CKAP5Q14008 2032 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 ZNF106Q9H2Y7 1883 aaKnown RBP15.12■□□□□ 0.01
VRK3-207ENST00000594092 ATG2BQ96BY7 2078 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 SHISA7A6NL88 538 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 TCP11X1B4DZS4 312 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 C1QTNF3-AMACRE9PGA6 284 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 GPR39O43194 453 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 SPINT1O43278 529 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 SRP72O76094 671 aaKnown RBP15.12■□□□□ 0.01
VRK3-207ENST00000594092 PRAMEF1O95521 474 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 SRFP11831 508 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 GLULP15104 373 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 NTSR1P30989 418 aa15.12■□□□□ 0.01
VRK3-207ENST00000594092 PSMD8P48556 350 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms