RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PIP5K1BO14986 540 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 LDB2O43679 373 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 CDK14O94921 469 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 HSPA8P11142 646 aaKnown RBP16.47■□□□□ 0.23
LIG1-206ENST00000594067 SLC2A3P11169 496 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 ATP4BP51164 291 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 YBX1P67809 324 aaKnown RBP16.47■□□□□ 0.23
LIG1-206ENST00000594067 CAPRIN1Q14444 709 aaKnown RBP16.47■□□□□ 0.23
LIG1-206ENST00000594067 CLVS1Q8IUQ0 354 aaPredicted RBP16.47■□□□□ 0.23
LIG1-206ENST00000594067 PCYOX1LQ8NBM8 494 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 ISOC1Q96CN7 298 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 ZYG11BQ9C0D3 744 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 FAIMQ9NVQ4 179 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 PADI3Q9ULW8 664 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 AURKCQ9UQB9 309 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 ARL5AQ9Y689 179 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 CEP350Q5VT06 3117 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 GPR182O15218 404 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 GNAO1P09471 354 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 ATXN1LP0C7T5 689 aaKnown RBP16.47■□□□□ 0.23
LIG1-206ENST00000594067 PIRTP0C851 137 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 UGT1A6P19224 532 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 TIAL1Q01085 375 aaKnown RBP eCLIP16.47■□□□□ 0.23
LIG1-206ENST00000594067 OR4D1Q15615 310 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 PFKFB4Q16877 469 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 MS4A13Q5J8X5 152 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 GNASQ5JWF2 1037 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 SPRYD7Q5W111 196 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 GPR141Q7Z602 305 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 GPR180Q86V85 440 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 DDIASQ8IXT1 998 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 ARRDC2Q8TBH0 407 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 BLOC1S5Q8TDH9 187 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 ADAMTS16Q8TE57 1224 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 TWIST2Q8WVJ9 160 aa16.47■□□□□ 0.23
LIG1-206ENST00000594067 TDRKHQ9Y2W6 561 aaKnown RBP16.47■□□□□ 0.23
LIG1-206ENST00000594067 GOT2P00505 430 aaKnown RBP16.46■□□□□ 0.23
LIG1-206ENST00000594067 RHOQP17081 205 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 CHRM3P20309 590 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 CAPN3P20807 821 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 FDXRP22570 491 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 TBX4P57082 545 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 NRG1Q02297 640 aaPredicted RBP16.46■□□□□ 0.23
LIG1-206ENST00000594067 TUSC3Q13454 348 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 SEMA3AQ14563 771 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 DDR2Q16832 855 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 ZBED5Q49AG3 693 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 KCTD21Q4G0X4 260 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 GALNT7Q86SF2 657 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 CIR1Q86X95 450 aaPredicted RBP16.46■□□□□ 0.23
LIG1-206ENST00000594067 SPPL2CQ8IUH8 684 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 ZNF683Q8IZ20 524 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 SMYD1Q8NB12 490 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 C12orf43Q96C57 262 aaKnown RBP16.46■□□□□ 0.23
LIG1-206ENST00000594067 ROPN1LQ96C74 230 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 C1orf74Q96LT6 269 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 TRIM8Q9BZR9 551 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 PRDM5Q9NQX1 630 aaPredicted RBP16.46■□□□□ 0.23
LIG1-206ENST00000594067 ARMC1Q9NVT9 282 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 TUBA8Q9NY65 449 aaPredicted RBP16.46■□□□□ 0.23
LIG1-206ENST00000594067 BTRCQ9Y297 605 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 A0A087WXM4 84 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 FAM149AA5PLN7 773 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 TPST1O60507 370 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 EFEMP1Q12805 493 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 FBXO48Q5FWF7 155 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 IRAK1BP1Q5VVH5 260 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 ERMP1Q7Z2K6 904 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 OR13C4Q8NGS5 318 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 IGSF8Q969P0 613 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 SLC39A13Q96H72 371 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 GPATCH1Q9BRR8 931 aaKnown RBP16.46■□□□□ 0.23
LIG1-206ENST00000594067 TLR6Q9Y2C9 796 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 Q9Y3F1 56 aa16.46■□□□□ 0.23
LIG1-206ENST00000594067 H3BMM5 538 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 AZIN1O14977 448 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 GLP2RO95838 553 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 TBX18O95935 607 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 PRSS56P0CW18 603 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 TPP2P29144 1249 aaPredicted RBP16.45■□□□□ 0.22
LIG1-206ENST00000594067 SLC26A3P40879 764 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 NFKB2Q00653 900 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 PLOD1Q02809 727 aaPredicted RBP16.45■□□□□ 0.22
LIG1-206ENST00000594067 YWHAHQ04917 246 aaPredicted RBP16.45■□□□□ 0.22
LIG1-206ENST00000594067 IRF5Q13568 498 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 C16orf72Q14CZ0 275 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 TBCELQ5QJ74 424 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 MFSD2AQ8NA29 543 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 TCF12Q99081 682 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 TBCCD1Q9NVR7 557 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 SMOXQ9NWM0 555 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 PTBP2Q9UKA9 531 aaKnown RBP16.45■□□□□ 0.22
LIG1-206ENST00000594067 CDC14AQ9UNH5 594 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 ANGPT2O15123 496 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 CD3EAPO15446 510 aaKnown RBP16.45■□□□□ 0.22
LIG1-206ENST00000594067 HMBSP08397 361 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 LINC00032P0C843 101 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 GALNT3Q14435 633 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 RAP1GAP2Q684P5 730 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 SLC15A3Q8IY34 581 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms