RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ZCCHC14Q8WYQ9 949 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 QKIQ96PU8 341 aaKnown RBP eCLIP18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 AGAP2Q99490 1192 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 OSBPL8Q9BZF1 889 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 CYP4F12Q9HCS2 524 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 CFAP47Q6ZTR5 3102 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 APC2O95996 2303 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 C1orf232A0A0U1RR37 186 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 CPED1A4D0V7 1026 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 GOLGA6CA6NDK9 693 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 GOLGA6BA6NDN3 693 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 HACD1B0YJ81 288 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 MTSS1O43312 755 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 GOLGA6DP0CG33 693 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 PYGMP11217 842 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 GPR1P46091 355 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 SPINT3P49223 89 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 CDK18Q07002 472 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 XRCC4Q13426 336 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 NOMO1Q15155 1222 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 PCSK7Q16549 785 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 CDCP2Q5VXM1 449 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 ADAMTSL4Q6UY14 1074 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 GKN2Q86XP6 184 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 ZNF567Q8N184 647 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 PDCD7Q8N8D1 485 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 DCBLD1Q8N8Z6 715 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 CCL4L1Q8NHW4 92 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 HTR3CQ8WXA8 447 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 RIOK2Q9BVS4 552 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 C10orf88Q9H8K7 445 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 EVA1BQ9NVM1 165 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 GOLGA6AQ9NYA3 693 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 UBP1Q9NZI7 540 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 DOLKQ9UPQ8 538 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 SLC17A4Q9Y2C5 497 aa18.42■□□□□ 0.54
SHKBP1-202ENST00000593764 ACACAQ13085 2346 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 MT-CO3P00414 261 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 PIRTP0C851 137 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 NFKB1P19838 968 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 POLD2P49005 469 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 PERM1Q5SV97 790 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 KDELC1Q6UW63 502 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 EFL1Q7Z2Z2 1120 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 LYSMD3Q7Z3D4 306 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 MDM1Q8TC05 714 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 ACTL9Q8TC94 416 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 SCG3Q8WXD2 468 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 GLMNQ92990 594 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 SCARF2Q96GP6 870 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 VAT1Q99536 393 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 MAGEE1Q9HCI5 957 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 MOSPD1Q9UJG1 213 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 AMFRQ9UKV5 643 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 CNOT6Q9ULM6 557 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 PADI4Q9UM07 663 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 GPR34Q9UPC5 381 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 CLCA2Q9UQC9 943 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 ADGRG1Q9Y653 693 aa18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 ARHGEF17Q96PE2 2063 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-202ENST00000593764 CASC3O15234 703 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 DDX3YO15523 660 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 PMPCBO75439 489 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 NDST3O95803 873 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 RBL1P28749 1068 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 RPIAP49247 311 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 OTUD4Q01804 1114 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 HENMT1Q5T8I9 393 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 OGFOD3Q6PK18 319 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 PID1Q7Z2X4 250 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 PEX26Q7Z412 305 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 TAF8Q7Z7C8 310 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 NRROSQ86YC3 692 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 SFTPA2Q8IWL1 248 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 TXLNBQ8N3L3 684 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 ARL10Q8N8L6 244 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 KYQ8NBH2 561 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 GPBAR1Q8TDU6 330 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 OXNAD1Q96HP4 312 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 COX14Q96I36 57 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 HIC2Q96JB3 615 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 FCRL5Q96RD9 977 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 CCDC86Q9H6F5 360 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 CARS2Q9HA77 564 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 SIRPGQ9P1W8 387 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 KLHL8Q9P2G9 620 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 GULP1Q9UBP9 304 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 DKK4Q9UBT3 224 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 FAM153AQ9UHL3 310 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 SUFUQ9UMX1 484 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 PACSIN2Q9UNF0 486 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 TMEM98Q9Y2Y6 226 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 ST14Q9Y5Y6 855 aa18.4■□□□□ 0.54
SHKBP1-202ENST00000593764 ANKRD11Q6UB99 2663 aaPredicted RBP18.39■□□□□ 0.54
SHKBP1-202ENST00000593764 LOC285095A0A1B0GVY8 99 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 RGSL1A5PLK6 1076 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 GOLGA6L6A8MZA4 724 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 H7C0C1 242 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 FTCDO95954 541 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 IVLP07476 585 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms