RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 B4GAT1O43505 415 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 TRBC1P01850 177 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 KRT7P08729 469 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 FAM228BP0C875 321 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 PLA2G2AP14555 144 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 MX2P20592 715 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 ADCY8P40145 1251 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 GPR1P46091 355 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 ZSCAN23Q3MJ62 389 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 DENND2CQ68D51 928 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 JAMLQ86YT9 394 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 AP2M1Q96CW1 435 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 NT5MQ9NPB1 228 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 PISDQ9UG56 409 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 ZNF462Q96JM2 2506 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 SCN8AQ9UQD0 1980 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 ARHGEF17Q96PE2 2063 aaPredicted RBP18.79■□□□□ 0.6
CCDC43-205ENST00000592333 ITGB2P05107 769 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 HNRNPH3P31942 346 aaKnown RBP18.79■□□□□ 0.6
CCDC43-205ENST00000592333 GNPDA1P46926 289 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 CTBSQ01459 385 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 PTSQ03393 145 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 DPYSL3Q14195 570 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 MAP9Q49MG5 647 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 LRRC66Q68CR7 880 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 NCBP2-AS2Q69YL0 99 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 EXD1Q8NHP7 514 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 FAF2Q96CS3 445 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 TDRD1Q9BXT4 1180 aaKnown RBP18.79■□□□□ 0.6
CCDC43-205ENST00000592333 ABCG8Q9H221 673 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 CBX8Q9HC52 389 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 PCDHB11Q9Y5F2 797 aa18.79■□□□□ 0.6
CCDC43-205ENST00000592333 RGSL1A5PLK6 1076 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 PROSCO94903 275 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 ECEL1O95672 775 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 SOD1P00441 154 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 PDHA1P08559 390 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 ATXN8OSP0DMR3 200 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 EPHB1P54762 984 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 ITKQ08881 620 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 BIRC2Q13490 618 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 NFKBIBQ15653 356 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 ANKRD20A8PQ5CZ79 823 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 TSPAN33Q86UF1 283 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 DTX1Q86Y01 620 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 NAGSQ8N159 534 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 KCTD6Q8NC69 237 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 OR4D9Q8NGE8 314 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 ZNF564Q8TBZ8 553 aaPredicted RBP18.78■□□□□ 0.6
CCDC43-205ENST00000592333 COX14Q96I36 57 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 BTBD6Q96KE9 485 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 VPS18Q9P253 973 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 NENFQ9UMX5 172 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 PCDHGA3Q9Y5H0 932 aa18.78■□□□□ 0.6
CCDC43-205ENST00000592333 AHCTF1Q8WYP5 2266 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 GOLGA6CA6NDK9 693 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 GOLGA6BA6NDN3 693 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 ZNF487B1APH4 448 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 B8ZZF3 427 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 EFSO43281 561 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 MFSD11O43934 449 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 H2AFZP0C0S5 128 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 GOLGA6DP0CG33 693 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 HGFP14210 728 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 CD1CP29017 333 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 ALDH4A1P30038 563 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 MAN1A1P33908 653 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 FASLGP48023 281 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 STC1P52823 247 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 LIMK2P53671 638 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 GPLD1P80108 840 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 PYCR3Q53H96 274 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 PHF19Q5T6S3 580 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 SLC30A9Q6PML9 568 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 H2AFVQ71UI9 128 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 VSIG1Q86XK7 387 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 SFTPA2Q8IWL1 248 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 CCDC112Q8NEF3 446 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 HDAC11Q96DB2 347 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 SGF29Q96ES7 293 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 OR2M4Q96R27 311 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 RBM22Q9NW64 420 aaKnown RBP eCLIP18.77■□□□□ 0.61e-7■■■■■ 41.1
CCDC43-205ENST00000592333 GOLGA6AQ9NYA3 693 aa18.77■□□□□ 0.6
CCDC43-205ENST00000592333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCDC43-205ENST00000592333 PRAMEF33A0A0G2JMD5 474 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 GOLGA6L19H0YKK7 550 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 PRAMEF10O60809 474 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 GYPCP04921 128 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 TPM3P06753 285 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 CD48P09326 243 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 CTPS1P17812 591 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 ITIH1P19827 911 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 AK4P27144 223 aaPredicted RBP18.76■□□□□ 0.59
CCDC43-205ENST00000592333 SSR1P43307 286 aaKnown RBP18.76■□□□□ 0.59
CCDC43-205ENST00000592333 MAZP56270 477 aaKnown RBP18.76■□□□□ 0.59
CCDC43-205ENST00000592333 OR1D5P58170 312 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 MMRN1Q13201 1228 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 USP53Q70EK8 1073 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 TMPRSS9Q7Z410 1059 aa18.76■□□□□ 0.59
CCDC43-205ENST00000592333 LUZP1Q86V48 1076 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms