RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SLC38A8A6NNN8 435 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 MDM4O15151 490 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 UGT2B4P06133 528 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PRKG2Q13237 762 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 KRT77Q7Z794 578 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 NELL1Q92832 810 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 CLK4Q9HAZ1 481 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 ZFYVE1Q9HBF4 777 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 NFKBIL1Q9UBC1 381 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 KLQ9UEF7 1012 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 MCM8Q9UJA3 840 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 DMTF1Q9Y222 760 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 EFR3BQ9Y2G0 817 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 KCPQ6ZWJ8 1503 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 ECDO95905 644 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 ITGA2BP08514 1039 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 TPP2P29144 1249 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 POU5F1Q01860 360 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 ZNF846Q147U1 533 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 TOMM20Q15388 145 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 AAK1Q2M2I8 961 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 ADAMTSL2Q86TH1 951 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 SLC41A1Q8IVJ1 513 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 C4orf32Q8N8J7 132 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 DQX1Q8TE96 717 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 RTKNQ9BST9 563 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 TBCDQ9BTW9 1192 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 EXO5Q9H790 373 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 IDO1P14902 403 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 CLK3P49761 638 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 CDH4P55283 916 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 MFSD5Q6N075 450 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 BHLHB9Q6PI77 547 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 OR10G6Q8NH81 332 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 FZD8Q9H461 694 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 POLR1BQ9H9Y6 1135 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 RCOR3Q9P2K3 495 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 A0A1W2PQ45 241 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 A0A1W2PQY0 241 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 NRP1O14786 923 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 ENO2P09104 434 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 PTSQ03393 145 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 NR1D2Q14995 579 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 TMEM63BQ5T3F8 832 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 GDF6Q6KF10 455 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 PAGE2Q7Z2X7 111 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 ZNF671Q8TAW3 534 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 CD101Q93033 1021 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 TCHHQ07283 1943 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 DNM1LO00429 736 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 CCNDBP1O95273 360 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 FSHRP23945 695 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 BNC1Q01954 994 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 KCTD21Q4G0X4 260 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 OFCC1Q8IZS5 231 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 ADCY4Q8NFM4 1077 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 OR52L1Q8NGH7 329 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 WFIKKN2Q8TEU8 576 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 PCED1BQ96HM7 432 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 SLC38A2Q96QD8 506 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 WDR12Q9GZL7 423 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 MUC13Q9H3R2 512 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 KCTD5Q9NXV2 234 aa13.3□□□□□ -0.28
SMARCA4-216ENST00000591545 OTCP00480 354 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 GNSP15586 552 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 TFEBP19484 476 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 IDSP22304 550 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 WNT3AP56704 352 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 USP4Q13107 963 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 POTEHQ6S545 545 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 CRTC3Q6UUV7 619 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 AP3S1Q92572 193 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 IKZF3Q9UKT9 509 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 ZNF232Q9UNY5 417 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 MRPS33Q9Y291 106 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 DHRS12A0PJE2 317 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 WNT7AO00755 349 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 ENTPD5O75356 428 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 MYBL2P10244 700 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 ALPPL2P10696 532 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 LBX1P52954 281 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 USP46P62068 366 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 RPL7AP62424 266 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 OR6K2Q8NGY2 324 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 SLC4A5Q9BY07 1137 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 B3GNT5Q9BYG0 378 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 CDH19Q9H159 772 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 NEK6Q9HC98 313 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 MAGEL2Q9UJ55 1249 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 ERGIC3Q9Y282 383 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 VIPP01282 170 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 GSSP48637 474 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 POLD2P49005 469 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 ILF3Q12906 894 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 GPRIN3Q6ZVF9 776 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 EFCAB3Q8N7B9 438 aa13.29□□□□□ -0.28
SMARCA4-216ENST00000591545 BPIFB6Q8NFQ5 453 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms