RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TRIM58Q8NG06 486 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 FAM174AQ8TBP5 190 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 AP2M1Q96CW1 435 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 MS4A14Q96JA4 679 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 CNDP2Q96KP4 475 aaKnown RBP11.49□□□□□ -0.57
VMP1-211ENST00000591315 WDR92Q96MX6 357 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 VAT1Q99536 393 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 LRRC61Q9BV99 259 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 ADGRE3Q9BY15 652 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 CARD9Q9H257 536 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 WDR26Q9H7D7 661 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 BPIFA1Q9NP55 256 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 ARFGAP3Q9NP61 516 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 CNOT6Q9ULM6 557 aaKnown RBP11.49□□□□□ -0.57
VMP1-211ENST00000591315 TMEM98Q9Y2Y6 226 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 PCYT1BQ9Y5K3 369 aaPredicted RBP11.49□□□□□ -0.57
VMP1-211ENST00000591315 MYLKQ15746 1914 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 LY6G6EA0A0G2JKS1 128 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 C5orf60A6NFR6 353 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 FADS2P1A8MWK0 482 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 CASC3O15234 703 aaKnown RBP11.48□□□□□ -0.57
VMP1-211ENST00000591315 YKT6O15498 198 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 CEP104O60308 925 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 LDOC1O95751 146 aaPredicted RBP11.48□□□□□ -0.57
VMP1-211ENST00000591315 FGGP02679 453 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 ATP1A1P05023 1023 aaKnown RBP11.48□□□□□ -0.57
VMP1-211ENST00000591315 ZSCAN5DPP0CG00 497 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 TSHRP16473 764 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 ZNF30P17039 623 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 CA5AP35218 305 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 ADRA1AP35348 466 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 GPR1P46091 355 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 KIAA1024LP59773 190 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 HNRNPKP61978 463 aaKnown RBP eCLIP11.48□□□□□ -0.57
VMP1-211ENST00000591315 CDK3Q00526 305 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 PPARDQ03181 441 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 PTK2BQ14289 1009 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 SLC1A5Q15758 541 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 SLC14A2Q15849 920 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 PROX2Q3B8N5 592 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 ZNF648Q5T619 568 aaPredicted RBP11.48□□□□□ -0.57
VMP1-211ENST00000591315 TMC3Q7Z5M5 1100 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 TTC30BQ8N4P2 665 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 CHCHD4Q8N4Q1 142 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 GPR26Q8NDV2 337 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 CCL4L1Q8NHW4 92 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 TEX101Q9BY14 249 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 GPR63Q9BZJ6 419 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 ZFYVE1Q9HBF4 777 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 PIH1D1Q9NWS0 290 aaKnown RBP11.48□□□□□ -0.57
VMP1-211ENST00000591315 KLQ9UEF7 1012 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 FTSJ1Q9UET6 329 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 APOBEC3BQ9UH17 382 aaKnown RBP11.48□□□□□ -0.57
VMP1-211ENST00000591315 MOSPD1Q9UJG1 213 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 WASF3Q9UPY6 502 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 PLEKHM1Q9Y4G2 1056 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 KCTD3Q9Y597 815 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 OAS3Q9Y6K5 1087 aaKnown RBP11.48□□□□□ -0.57
VMP1-211ENST00000591315 U3KQA8 63 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 PTPRBP23467 1997 aa11.48□□□□□ -0.57
VMP1-211ENST00000591315 MAP1BP46821 2468 aaKnown RBP11.48□□□□□ -0.57
VMP1-211ENST00000591315 PLXNB3Q9ULL4 1909 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 CACNB4O00305 520 aaPredicted RBP11.47□□□□□ -0.57
VMP1-211ENST00000591315 AQP9O43315 295 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 HYAL3O43820 417 aaPredicted RBP11.47□□□□□ -0.57
VMP1-211ENST00000591315 CEACAM5P06731 702 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 BPIP17213 487 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 NFKBIAP25963 317 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 PMLP29590 882 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 KCNJ1P48048 391 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 HK3P52790 923 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 GEMP55040 296 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 DPTQ07507 201 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 MPP3Q13368 585 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 ITPRIPL1Q6GPH6 555 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 DENND5AQ6IQ26 1287 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 RANBP10Q6VN20 620 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 ARHGEF18Q6ZSZ5 1173 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 GLRX5Q86SX6 157 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 NRSN1Q8IZ57 195 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 C17orf53Q8N3J3 647 aaPredicted RBP11.47□□□□□ -0.57
VMP1-211ENST00000591315 OR56A4Q8NGH8 313 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 OR4C6Q8NH72 309 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 BLOC1S5Q8TDH9 187 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 COG1Q8WTW3 980 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 ANP32BQ92688 251 aaKnown RBP11.47□□□□□ -0.57
VMP1-211ENST00000591315 CDC6Q99741 560 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 FRMD8Q9BZ67 464 aaPredicted RBP11.47□□□□□ -0.57
VMP1-211ENST00000591315 TMEM168Q9H0V1 697 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 FAM83DQ9H4H8 585 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 MAGEE1Q9HCI5 957 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 CYP4F12Q9HCS2 524 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 TMPRSS11EQ9UL52 423 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 ST14Q9Y5Y6 855 aa11.47□□□□□ -0.57
VMP1-211ENST00000591315 COL5A1P20908 1838 aaPredicted RBP11.46□□□□□ -0.57
VMP1-211ENST00000591315 TOR1BO14657 336 aa11.46□□□□□ -0.57
VMP1-211ENST00000591315 YY2O15391 372 aa11.46□□□□□ -0.57
VMP1-211ENST00000591315 GPR39O43194 453 aa11.46□□□□□ -0.57
VMP1-211ENST00000591315 TNFSF14O43557 240 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms