RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 COQ4Q9Y3A0 265 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 PCDHB4Q9Y5E5 795 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 ABCA4P78363 2273 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 A0A0U1RQS6 177 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 PPP1R3GB7ZBB8 358 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 CALUO43852 315 aaPredicted RBP6.4□□□□□ -1.38
DNMT1-222ENST00000590619 KIF1CO43896 1103 aaKnown RBP6.4□□□□□ -1.38
DNMT1-222ENST00000590619 JRKO75564 520 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 GRAP2O75791 330 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 PIGNO95427 931 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 MYCLP1P12525 358 aaPredicted RBP6.4□□□□□ -1.38
DNMT1-222ENST00000590619 FOSL1P15407 271 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 TFE3P19532 575 aaPredicted RBP6.4□□□□□ -1.38
DNMT1-222ENST00000590619 PSMC2P35998 433 aaKnown RBP6.4□□□□□ -1.38
DNMT1-222ENST00000590619 MMP12P39900 470 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 CXCR3P49682 368 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 MXI1P50539 228 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 VAV2P52735 878 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 KCNK10P57789 538 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 YWHAEP62258 255 aaKnown RBP6.4□□□□□ -1.38
DNMT1-222ENST00000590619 HHEXQ03014 270 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 FOXD4Q12950 439 aaPredicted RBP6.4□□□□□ -1.38
DNMT1-222ENST00000590619 RALGDSQ12967 914 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 SLC39A14Q15043 492 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 STILQ15468 1287 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 CBWD6Q4V339 395 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 CBWD3Q5JTY5 395 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 CBWD5Q5RIA9 395 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 IZUMO3Q5VZ72 239 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 AFMIDQ63HM1 303 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 ERAP2Q6P179 960 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 IYDQ6PHW0 289 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 XKRXQ6PP77 449 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 ZSWIM9Q86XI8 627 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 CEP97Q8IW35 865 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 WDTC1Q8N5D0 677 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 IQUBQ8NA54 791 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 CHTF18Q8WVB6 975 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 KLHL6Q8WZ60 621 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 SCARF2Q96GP6 870 aaPredicted RBP6.4□□□□□ -1.38
DNMT1-222ENST00000590619 TRAPPC9Q96Q05 1148 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 SMR3AQ99954 134 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 SPOCK3Q9BQ16 436 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 SARS2Q9NP81 518 aaKnown RBP6.4□□□□□ -1.38
DNMT1-222ENST00000590619 FGF21Q9NSA1 209 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 PIGVQ9NUD9 493 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 OGFRQ9NZT2 677 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 CSAG2Q9Y5P2 127 aa6.4□□□□□ -1.38
DNMT1-222ENST00000590619 FER1L5A0AVI2 2057 aa6.4□□□□□ -1.39
DNMT1-222ENST00000590619 FN1P02751 2386 aaKnown RBP6.39□□□□□ -1.39
DNMT1-222ENST00000590619 A0A1W2PQJ5 194 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 TSPAN11A1L157 253 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 A8MX80 341 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 CCL21O00585 134 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 TOX3O15405 576 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-222ENST00000590619 KDELR3O43731 214 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 RHOBTB3O94955 611 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 IVLP07476 585 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 GLI1P08151 1106 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 FOLR1P15328 257 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 TYRP1P17643 537 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 NR2F2P24468 414 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 ERCC5P28715 1186 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-222ENST00000590619 DNAJA1P31689 397 aaKnown RBP6.39□□□□□ -1.39
DNMT1-222ENST00000590619 EPHA4P54764 986 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 RRADP55042 308 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 PPP2R2AP63151 447 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 Q0VFX4 171 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 CYTH1Q15438 398 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 ASIC2Q16515 512 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 NFIL3Q16649 462 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 KYNUQ16719 465 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 PYCR3Q53H96 274 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 BRMS1LQ5PSV4 323 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 TMCO4Q5TGY1 634 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 OTUD1Q5VV17 481 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-222ENST00000590619 TMEM198Q66K66 360 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 SPOCD1Q6ZMY3 1216 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 DRC7Q8IY82 874 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 SLC38A9Q8NBW4 561 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 KAT5Q92993 513 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 MR1Q95460 341 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 SH3KBP1Q96B97 665 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 MTFMTQ96DP5 389 aaKnown RBP6.39□□□□□ -1.39
DNMT1-222ENST00000590619 SGSM3Q96HU1 749 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 GDAP1L1Q96MZ0 367 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 TGM7Q96PF1 710 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 FCRL4Q96PJ5 515 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 FOXC2Q99958 501 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 SLX1AQ9BQ83 275 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 TMEM121Q9BTD3 319 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 ZYG11BQ9C0D3 744 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 ENKD1Q9H0I2 346 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 CHST8Q9H2A9 424 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 PHPT1Q9NRX4 125 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-222ENST00000590619 ZNHIT2Q9UHR6 403 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 TCFL5Q9UL49 500 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 ATP8A1Q9Y2Q0 1164 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 TMEM98Q9Y2Y6 226 aa6.39□□□□□ -1.39
DNMT1-222ENST00000590619 MORC2Q9Y6X9 1032 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms