RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 GPBAR1Q8TDU6 330 aa20.51■□□□□ 0.87
CIRBP-226ENST00000590171 IMP4Q96G21 291 aaKnown RBP20.51■□□□□ 0.87
CIRBP-226ENST00000590171 TRIB3Q96RU7 358 aa20.51■□□□□ 0.87
CIRBP-226ENST00000590171 MLPHQ9BV36 600 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-226ENST00000590171 BRD8Q9H0E9 1235 aa20.51■□□□□ 0.87
CIRBP-226ENST00000590171 DPEP2Q9H4A9 486 aa20.51■□□□□ 0.87
CIRBP-226ENST00000590171 ENTPD2Q9Y5L3 495 aa20.51■□□□□ 0.87
CIRBP-226ENST00000590171 LAMA5O15230 3695 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 C1orf232A0A0U1RR37 186 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 A0A1W2PNU3 283 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 ANKRD66B4E2M5 251 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 NTN3O00634 580 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 CST8O60676 142 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 NDUFA10O95299 355 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 EIF2S3P41091 472 aaKnown RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 NR2C2P49116 596 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 SPIDRQ14159 915 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 TFDP2Q14188 446 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 GALNT3Q14435 633 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 PRKD1Q15139 912 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 TBC1D25Q3MII6 688 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 TRIM74Q86UV6 250 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 RAVER1Q8IY67 606 aaKnown RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 KATNAL2Q8IYT4 538 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 NRSN1Q8IZ57 195 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 OR6C4Q8NGE1 309 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 SNIP1Q8TAD8 396 aaKnown RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 ATXN7L3BQ96GX2 97 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 WDR24Q96S15 920 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 RIOK2Q9BVS4 552 aaKnown RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 LUC7LQ9NQ29 371 aaKnown RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 SPATS2LQ9NUQ6 558 aaKnown RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 TRNAU1APQ9NX07 287 aaKnown RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 EPN1Q9Y6I3 576 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-226ENST00000590171 KNTC1P50748 2209 aa20.5■□□□□ 0.87
CIRBP-226ENST00000590171 hCG_1818297A0A087WSY0 165 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 RCCD1A6NED2 376 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 IVLP07476 585 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 ACTN2P35609 894 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 LSSP48449 732 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 ILF3Q12906 894 aaKnown RBP eCLIP20.49■□□□□ 0.87
CIRBP-226ENST00000590171 C14orf28Q4W4Y0 310 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 TEX44Q53QW1 395 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 TFDP3Q5H9I0 405 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 CERCAMQ5T4B2 595 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 KDELC2Q7Z4H8 507 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 NT5DC3Q86UY8 548 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 KRT35Q92764 455 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 FGF11Q92914 225 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 TADA1Q96BN2 335 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 ADGRE3Q9BY15 652 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 GSDMCQ9BYG8 508 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 SLC25A51Q9H1U9 297 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 POLR1BQ9H9Y6 1135 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 TMEM98Q9Y2Y6 226 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 ST14Q9Y5Y6 855 aa20.49■□□□□ 0.87
CIRBP-226ENST00000590171 ACACAQ13085 2346 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 ASXL3Q9C0F0 2248 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 A0A1W2PQM1 296 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 INPP4BO15327 924 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 ZRANB2O95218 330 aaKnown RBP eCLIP20.48■□□□□ 0.87
CIRBP-226ENST00000590171 RPLP0P05388 317 aaKnown RBP20.48■□□□□ 0.87
CIRBP-226ENST00000590171 PYGLP06737 847 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 GLB1P16278 677 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 PTPN3P26045 913 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 AK4P27144 223 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-226ENST00000590171 SPINT3P49223 89 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 CCL7P80098 99 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 HLTFQ14527 1009 aaKnown RBP eCLIP20.48■□□□□ 0.87
CIRBP-226ENST00000590171 PCSK7Q16549 785 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 C3orf38Q5JPI3 329 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 BZW1Q7L1Q6 419 aaKnown RBP20.48■□□□□ 0.87
CIRBP-226ENST00000590171 LYSMD3Q7Z3D4 306 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 TMTC1Q8IUR5 882 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 EXD1Q8NHP7 514 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 SPATA22Q8NHS9 363 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 GRAMD1AQ96CP6 724 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 SCARF2Q96GP6 870 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-226ENST00000590171 COX14Q96I36 57 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 HIC2Q96JB3 615 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 GLOD4Q9HC38 313 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 TAAR2Q9P1P5 351 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 SATB2Q9UPW6 733 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 REXO2Q9Y3B8 237 aaKnown RBP20.48■□□□□ 0.87
CIRBP-226ENST00000590171 RNF215Q9Y6U7 377 aa20.48■□□□□ 0.87
CIRBP-226ENST00000590171 DXOO77932 396 aaKnown RBP20.47■□□□□ 0.87
CIRBP-226ENST00000590171 MT-CYBP00156 380 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-226ENST00000590171 FGF1P05230 155 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 ITPKBP27987 946 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 ADCY8P40145 1251 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 CTBSQ01459 385 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 WASHC5Q12768 1159 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 SLC14A2Q15849 920 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 HENMT1Q5T8I9 393 aaKnown RBP20.47■□□□□ 0.87
CIRBP-226ENST00000590171 RAD9BQ6WBX8 426 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 MARK2Q7KZI7 788 aaKnown RBP20.47■□□□□ 0.87
CIRBP-226ENST00000590171 DAAM2Q86T65 1068 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 CCDC50Q8IVM0 306 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 RCOR2Q8IZ40 523 aa20.47■□□□□ 0.87
CIRBP-226ENST00000590171 LSMEM2Q8N112 164 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms