RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 CD84Q9UIB8 345 aa17.89■□□□□ 0.45
PRKCSH-211ENST00000590098 CAPN11Q9UMQ6 739 aa17.89■□□□□ 0.45
PRKCSH-211ENST00000590098 SLC17A4Q9Y2C5 497 aa17.89■□□□□ 0.45
PRKCSH-211ENST00000590098 B4GAT1O43505 415 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 PDHA1P08559 390 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 CD48P09326 243 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 LIPCP11150 499 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 CES1P23141 567 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 GJC1P36383 396 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 ADCY8P40145 1251 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 PBX1P40424 430 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 GARSP41250 739 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 CTBSQ01459 385 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 TGIF1Q15583 401 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 CLPPQ16740 277 aaPredicted RBP17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 LRRC66Q68CR7 880 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 ALKBH5Q6P6C2 394 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 ADAMTSL4Q6UY14 1074 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 TMPRSS9Q7Z410 1059 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 ZNF438Q7Z4V0 828 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 LUZP1Q86V48 1076 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 SLITRK4Q8IW52 837 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 KCTD6Q8NC69 237 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 FAM71BQ8TC56 605 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 USP7Q93009 1102 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 ABCG8Q9H221 673 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 RDH14Q9HBH5 336 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 LUC7L2Q9Y383 392 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 TTLL3Q9Y4R7 772 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 PCDHB11Q9Y5F2 797 aa17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 ZFC3H1O60293 1989 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-211ENST00000590098 PRAMEF33A0A0G2JMD5 474 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 A0A0J9YYE9 177 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 GOLGA6L19H0YKK7 550 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 MATN3O15232 486 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 MFSD11O43934 449 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 FZD6O60353 706 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 PRAMEF10O60809 474 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 TRBC1P01850 177 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 PYGLP06737 847 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 ZNF30P17039 623 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 CA4P22748 312 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 ETV5P41161 510 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 GPR3P46089 330 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 PTSQ03393 145 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 GALNT2Q10471 571 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 DPYSL3Q14195 570 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 PAFAH1B3Q15102 231 aaKnown RBP17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 IFI16Q16666 785 aaKnown RBP17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 TMEM164Q5U3C3 297 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 RFLNAQ6ZTI6 216 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 USP53Q70EK8 1073 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 MAP7D3Q8IWC1 876 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 ZNF564Q8TBZ8 553 aaPredicted RBP17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 PTCD2Q8WV60 388 aaKnown RBP17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 MED8Q96G25 268 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 RBM22Q9NW64 420 aaKnown RBP eCLIP17.87■□□□□ 0.459e-7■■■□□ 15.2
PRKCSH-211ENST00000590098 AMACRQ9UHK6 382 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 DNPEPQ9ULA0 475 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 TMEM98Q9Y2Y6 226 aa17.87■□□□□ 0.45
PRKCSH-211ENST00000590098 A0A0U1RQS6 177 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 SYCE3A1L190 88 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 CCNCP24863 283 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 ACTR1BP42025 376 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 ACTR1AP61163 376 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 DSC2Q02487 901 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 NR1D2Q14995 579 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 C16orf72Q14CZ0 275 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 PDK2Q15119 407 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 ANKRD20A8PQ5CZ79 823 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 MANEAQ5SRI9 462 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 NCBP2-AS2Q69YL0 99 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 ZNF765Q7L2R6 523 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 NLRP8Q86W28 1048 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 PATE1Q8WXA2 126 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 MAML1Q92585 1016 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 SCAMP4Q969E2 229 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 SGF29Q96ES7 293 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 OR2M4Q96R27 311 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 NUDT22Q9BRQ3 303 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 ZNF670Q9BS34 389 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 CTTNBP2NLQ9P2B4 639 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 CHKBQ9Y259 395 aa17.86■□□□□ 0.45
PRKCSH-211ENST00000590098 MAP3K6O95382 1288 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 SOD1P00441 154 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 MX2P20592 715 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 CD82P27701 267 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 CD1CP29017 333 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 ARSEP51690 589 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 STC1P52823 247 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 SRSF6Q13247 344 aaKnown RBP17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 ATP13A4Q4VNC1 1196 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 ZFYVE27Q5T4F4 411 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 ALG1LQ6GMV1 187 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 MARK2Q7KZI7 788 aaKnown RBP17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 ZFAND4Q86XD8 727 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 GALNT13Q8IUC8 556 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 NRSN1Q8IZ57 195 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 NAGSQ8N159 534 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms