RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 WDR93Q6P2C0 686 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 LIMS2Q7Z4I7 341 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 C14orf80Q86SX3 495 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 TMTC1Q8IUR5 882 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 AADATQ8N5Z0 425 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 MYCBPAPQ8TBZ2 947 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 GANCQ8TET4 914 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 UCMAQ8WVF2 138 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 SKA1Q96BD8 255 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 FOXRED1Q96CU9 486 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-209ENST00000589941 MBD6Q96DN6 1003 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 PAGE5Q96GU1 130 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 MYOCQ99972 504 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 NACA2Q9H009 215 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 ABCG4Q9H172 646 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 NEUROG2Q9H2A3 272 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 ASB7Q9H672 318 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 VIPAS39Q9H9C1 493 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 FBXL12Q9NXK8 326 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 GDAP2Q9NXN4 497 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 GALNT8Q9NY28 637 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 FOXJ2Q9P0K8 574 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 CDH9Q9ULB4 789 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 DUSP10Q9Y6W6 482 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 H3BQF6 201 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 TEX33O43247 280 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 KIF5CO60282 957 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 PIAS2O75928 621 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 CYP1A1P04798 512 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 GYPCP04921 128 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 OR52Z1P0C646 297 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 SLC9A1P19634 815 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 PTX3P26022 381 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 UGT1A5P35504 534 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 PNPLA4P41247 253 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 LHX1P48742 406 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 METAP1P53582 386 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 ADPRHP54922 357 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 IL13RA1P78552 427 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 TFAMQ00059 246 aaKnown RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 EIF4HQ15056 248 aaKnown RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 KYAT1Q16773 422 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 HAUS3Q68CZ6 603 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 BORAQ6PGQ7 559 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 EFL1Q7Z2Z2 1120 aaKnown RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 KIF18BQ86Y91 864 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 NUP93Q8N1F7 819 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 HIPK4Q8NE63 616 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 OR2T34Q8NGX1 318 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 C9orf43Q8TAL5 461 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 GOLGA5Q8TBA6 731 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 PDCD6IPQ8WUM4 868 aaKnown RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 JPH3Q8WXH2 748 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 OVCA2Q8WZ82 227 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 CEP295NLQ96MC4 621 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 MRPL45Q9BRJ2 306 aaKnown RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 B3GNT5Q9BYG0 378 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 TMEM168Q9H0V1 697 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 RSPH9Q9H1X1 276 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-209ENST00000589941 C17orf75Q9HAS0 396 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 OXSMQ9NWU1 459 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 RWDD2AQ9UIY3 292 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 DAAM1Q9Y4D1 1078 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 ASB1Q9Y576 335 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 PCDHGA7Q9Y5G6 932 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 ABCA2Q9BZC7 2435 aa7.93□□□□□ -1.14
SMAD4-209ENST00000589941 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-209ENST00000589941 PRAMEF33A0A0G2JMD5 474 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 CPED1A4D0V7 1026 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 MROH6A6NGR9 719 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 K7ENM7 598 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 K7ESM1 405 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 LATO43561 262 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 PRAMEF10O60809 474 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 ERLIN1O75477 346 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 RNASEH2AO75792 299 aaKnown RBP7.92□□□□□ -1.14
SMAD4-209ENST00000589941 STC2O76061 302 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 XBP1P17861 261 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 ITIH1P19827 911 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 CDK11BP21127 795 aaKnown RBP7.92□□□□□ -1.14
SMAD4-209ENST00000589941 MUTP22033 750 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 HLA-FP30511 346 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 ETV5P41161 510 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 CCR5P51681 352 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 ZBTB16Q05516 673 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 ZNF177Q13360 481 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-209ENST00000589941 FILIP1LQ4L180 1135 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 ZNF542PQ5EBM4 170 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 LCE4AQ5TA78 99 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 USP30Q70CQ3 517 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 GPRIN1Q7Z2K8 1008 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 TMPRSS9Q7Z410 1059 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 ADIPOR2Q86V24 386 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 GRAMD1CQ8IYS0 662 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 PPM1KQ8N3J5 372 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 LRRC52Q8N7C0 313 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 SYT2Q8N9I0 419 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-209ENST00000589941 WFDC5Q8TCV5 224 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 CHTF18Q8WVB6 975 aa7.92□□□□□ -1.14
SMAD4-209ENST00000589941 NAPGQ99747 312 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms