RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 LRRC73Q5JTD7 316 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 C9orf64Q5T6V5 341 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 N4BP2L1Q5TBK1 243 aaPredicted RBP11.38□□□□□ -0.59
SMAD4-205ENST00000588745 HECTD2Q5U5R9 776 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 EGFLAMQ63HQ2 1017 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 FAM151BQ6UXP7 276 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 RGS9BPQ6ZS82 235 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 PARS2Q7L3T8 475 aaKnown RBP11.38□□□□□ -0.59
SMAD4-205ENST00000588745 LCA5Q86VQ0 697 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 CEP97Q8IW35 865 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 STK40Q8N2I9 435 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 CBARPQ8N350 705 aaPredicted RBP11.38□□□□□ -0.59
SMAD4-205ENST00000588745 ARMC2Q8NEN0 867 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 TMIEQ8NEW7 156 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 LPGAT1Q92604 370 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMAD4-205ENST00000588745 PBXIP1Q96AQ6 731 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 LRCH3Q96II8 777 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 RABEP2Q9H5N1 569 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 UBE2ZQ9H832 354 aaPredicted RBP11.38□□□□□ -0.59
SMAD4-205ENST00000588745 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.38□□□□□ -0.59
SMAD4-205ENST00000588745 APPL1Q9UKG1 709 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 HCN2Q9UL51 889 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 EMCNQ9ULC0 261 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 FNDC3AQ9Y2H6 1198 aaKnown RBP11.38□□□□□ -0.59
SMAD4-205ENST00000588745 STARD13Q9Y3M8 1113 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 SLC30A1Q9Y6M5 507 aa11.38□□□□□ -0.59
SMAD4-205ENST00000588745 A0A087X1B8 175 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 GLYATL1P3A0A0U1RQE8 302 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 C16orf96A6NNT2 1141 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 A8MX80 341 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 TCP11X1B4DZS4 312 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 KPNA3O00505 521 aaPredicted RBP11.37□□□□□ -0.59
SMAD4-205ENST00000588745 GAPDHSO14556 408 aaPredicted RBP11.37□□□□□ -0.59
SMAD4-205ENST00000588745 PLIN3O60664 434 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 NDUFS3O75489 264 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 SRP72O76094 671 aaKnown RBP11.37□□□□□ -0.59
SMAD4-205ENST00000588745 CHRM1P11229 460 aaPredicted RBP11.37□□□□□ -0.59
SMAD4-205ENST00000588745 COL6A2P12110 1019 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 HNRNPLP14866 589 aaKnown RBP eCLIP11.37□□□□□ -0.596e-10■■■□□ 17.8
SMAD4-205ENST00000588745 TIMP2P16035 220 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 TAC1P20366 129 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 ITGALP20701 1170 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 FDXRP22570 491 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 XPAP23025 273 aaPredicted RBP11.37□□□□□ -0.59
SMAD4-205ENST00000588745 ITGB7P26010 798 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 GMPRP36959 345 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 CDKN1CP49918 316 aaPredicted RBP11.37□□□□□ -0.59
SMAD4-205ENST00000588745 PTPN5P54829 565 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 SEMG2Q02383 582 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 ARHGEF7Q14155 803 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 ZNF460Q14592 562 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 E2F5Q15329 346 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 DBN1Q16643 649 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 ZDHHC20Q5W0Z9 365 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 DPPA4Q7L190 304 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 SNX20Q7Z614 316 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 PIANPQ8IYJ0 282 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 LRRC34Q8IZ02 419 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 PLD6Q8N2A8 252 aaKnown RBP11.37□□□□□ -0.59
SMAD4-205ENST00000588745 BCAS4Q8TDM0 211 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 LRRC8CQ8TDW0 803 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 TSNARE1Q96NA8 513 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 CCT8L2Q96SF2 557 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 OLFM1Q99784 485 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 P2RY13Q9BPV8 354 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 C1QTNF1Q9BXJ1 281 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 NSRP1Q9H0G5 558 aaKnown RBP11.37□□□□□ -0.59
SMAD4-205ENST00000588745 FAM96AQ9H5X1 160 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 PCDH12Q9NPG4 1184 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 TRPV5Q9NQA5 729 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 CACNA2D2Q9NY47 1150 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 CRYL1Q9Y2S2 319 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 ACOT9Q9Y305 439 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 BPTFQ12830 3046 aa11.37□□□□□ -0.59
SMAD4-205ENST00000588745 TRBV5-4A0A0C4DH59 114 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 UBA6A0AVT1 1052 aaPredicted RBP11.36□□□□□ -0.59
SMAD4-205ENST00000588745 WDR91A4D1P6 747 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 SPECC1L-ADORA2AF8WAN1 911 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 NDUFAB1O14561 156 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 NPC1O15118 1278 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 GPR39O43194 453 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 PROCP04070 461 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 EPHX1P07099 455 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 VIMP08670 466 aaKnown RBP11.36□□□□□ -0.59
SMAD4-205ENST00000588745 DRD4P21917 467 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 CTHP32929 405 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 MMP12P39900 470 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 GALK1P51570 392 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 PGGT1BP53609 377 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 RALGDSQ12967 914 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 NFATC2Q13469 925 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ENPP2Q13822 863 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 TSNAXIP1Q2TAA8 658 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 CCDC153Q494R4 210 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ERAP2Q6P179 960 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 C16orf46Q6P387 395 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ZNF549Q6P9A3 640 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 CERS6Q6ZMG9 384 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 CCDC91Q7Z6B0 441 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms