RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 OR2M4Q96R27 311 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 SEMA3CQ99985 751 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 PCDH18Q9HCL0 1135 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 ACSL6Q9UKU0 697 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 IGHV5-10-1A0A0J9YXX1 117 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 PSMD11O00231 422 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 MFSD11O43934 449 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 SERPINC1P01008 464 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 PDHA1P08559 390 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 ADCY8P40145 1251 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 PRKCIP41743 596 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 MMRN1Q13201 1228 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 SNAP47Q5SQN1 464 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 FAM129CQ86XR2 697 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 NAGSQ8N159 534 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 NDUFAF2Q8N183 169 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 AHCYL2Q96HN2 611 aaKnown RBP13.66□□□□□ -0.22
HDAC5-208ENST00000588419 NUP85Q9BW27 656 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 THAP2Q9H0W7 228 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 CLMPQ9H6B4 373 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 TRNAU1APQ9NX07 287 aaKnown RBP13.66□□□□□ -0.22
HDAC5-208ENST00000588419 KCTD5Q9NXV2 234 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 KCNK4Q9NYG8 393 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 AIPL1Q9NZN9 384 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 TMEM9Q9P0T7 183 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 TMEM63CQ9P1W3 806 aa13.66□□□□□ -0.22
HDAC5-208ENST00000588419 STMND1H3BQB6 276 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 IVLP07476 585 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 WT1P19544 449 aaPredicted RBP13.65□□□□□ -0.22
HDAC5-208ENST00000588419 CSF2RBP32927 897 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 MAPK9P45984 424 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 ATP1A2P50993 1020 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 DSC2Q02487 901 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 PIGHQ14442 188 aaPredicted RBP13.65□□□□□ -0.22
HDAC5-208ENST00000588419 NFKBIBQ15653 356 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 BOLA3Q53S33 107 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 ZNF574Q6ZN55 896 aaPredicted RBP13.65□□□□□ -0.22
HDAC5-208ENST00000588419 GALNT13Q8IUC8 556 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 NRSN1Q8IZ57 195 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 IL22RA1Q8N6P7 574 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 LRRN4Q8WUT4 740 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 ART4Q93070 314 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 SCAMP4Q969E2 229 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 SCRN2Q96FV2 425 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 NAP1L5Q96NT1 182 aaPredicted RBP13.65□□□□□ -0.22
HDAC5-208ENST00000588419 POLR1EQ9GZS1 481 aaKnown RBP13.65□□□□□ -0.22
HDAC5-208ENST00000588419 ABCG8Q9H221 673 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 SLC17A4Q9Y2C5 497 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 PRKAB1Q9Y478 270 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 ST14Q9Y5Y6 855 aa13.65□□□□□ -0.22
HDAC5-208ENST00000588419 PIEZO2Q9H5I5 2752 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 A0A1W2PQC6 194 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 EFCAB7A8K855 629 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 A8MU76 341 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 PPM1DO15297 605 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 SOD1P00441 154 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 CD48P09326 243 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 CD82P27701 267 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 CD1CP29017 333 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 CSTF2P33240 577 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC5-208ENST00000588419 SLC25A11Q02978 314 aaKnown RBP13.64□□□□□ -0.23
HDAC5-208ENST00000588419 KCNC4Q03721 635 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 PEX6Q13608 980 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 CCDC122Q5T0U0 273 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 ZFYVE27Q5T4F4 411 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 ZNF438Q7Z4V0 828 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 CCDC112Q8NEF3 446 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 LPCAT1Q8NF37 534 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 TEKT4Q8WW24 435 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 PIH1D2Q8WWB5 315 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 HTR3CQ8WXA8 447 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 MCCC1Q96RQ3 725 aaPredicted RBP13.64□□□□□ -0.23
HDAC5-208ENST00000588419 AGAP2Q99490 1192 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 SLC38A3Q99624 504 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 ISCUQ9H1K1 167 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 IP6K2Q9UHH9 426 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 CHKBQ9Y259 395 aa13.64□□□□□ -0.23
HDAC5-208ENST00000588419 CFAP46Q8IYW2 2715 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 IGHV1OR21-1A0A087WYE8 117 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 A0A1B0GTH6 734 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 HGSO14964 777 aaPredicted RBP13.63□□□□□ -0.23
HDAC5-208ENST00000588419 SLC4A1P02730 911 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 ATP1A1P05023 1023 aaKnown RBP13.63□□□□□ -0.23
HDAC5-208ENST00000588419 ITGB2P05107 769 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 FGF3P11487 239 aaPredicted RBP13.63□□□□□ -0.23
HDAC5-208ENST00000588419 ZNF165P49910 485 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 LIMK2P53671 638 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 NFATC2Q13469 925 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 NR1D2Q14995 579 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 TBR1Q16650 682 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 RALGPS1Q5JS13 557 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 NCBP2-AS2Q69YL0 99 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
HDAC5-208ENST00000588419 CHST15Q7LFX5 561 aaPredicted RBP13.63□□□□□ -0.23
HDAC5-208ENST00000588419 TECPR1Q7Z6L1 1165 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 C17orf82Q86X59 251 aaPredicted RBP13.63□□□□□ -0.23
HDAC5-208ENST00000588419 DTX1Q86Y01 620 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 AGBL5Q8NDL9 886 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 SLC37A2Q8TED4 501 aa13.63□□□□□ -0.23
HDAC5-208ENST00000588419 CPLX3Q8WVH0 158 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms