RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 EXT2Q93063 718 aa16.84■□□□□ 0.29
PRKCSH-205ENST00000587327 PREBQ9HCU5 417 aa16.84■□□□□ 0.29
PRKCSH-205ENST00000587327 UXTQ9UBK9 157 aaPredicted RBP16.84■□□□□ 0.29
PRKCSH-205ENST00000587327 CASP8AP2Q9UKL3 1982 aa16.83■□□□□ 0.29
PRKCSH-205ENST00000587327 PTPRDP23468 1912 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 DHRS12A0PJE2 317 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 AZIN1O14977 448 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 PIP5K1BO14986 540 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 BMP10O95393 424 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 SLC4A1P02730 911 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 ATXN1LP0C7T5 689 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 SLC2A3P11169 496 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 HSD17B1P14061 328 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 RHOQP17081 205 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 CAPN3P20807 821 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 FOXA1P55317 472 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 GRB7Q14451 532 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 TBCELQ5QJ74 424 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 LPCAT2Q7L5N7 544 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 SPPL2CQ8IUH8 684 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 PHYKPLQ8IUZ5 450 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 ZNF683Q8IZ20 524 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 RYBPQ8N488 228 aaPredicted RBP16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 CBR4Q8N4T8 237 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 TEX26Q8N6G2 289 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 PSMG2Q969U7 264 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 TADA1Q96BN2 335 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 TBATAQ96M53 351 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 ADAM2Q99965 735 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 TRIM15Q9C019 465 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 PRDM5Q9NQX1 630 aaPredicted RBP16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 AGPAT4Q9NRZ5 378 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 TRMT13Q9NUP7 481 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 GIMAP2Q9UG22 337 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 AURKCQ9UQB9 309 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 TLR6Q9Y2C9 796 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 NLRC5Q86WI3 1866 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 TANC1Q9C0D5 1861 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 PATJQ8NI35 1801 aa16.83■□□□□ 0.28
PRKCSH-205ENST00000587327 LOC285095A0A1B0GVY8 99 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 F8W810 466 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 FXYD1O00168 92 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 DLGAP1O14490 977 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 ANGPT2O15123 496 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 ITGB1P05556 798 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 MTHFD2P13995 350 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 INPP5AQ14642 412 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 PFKFB4Q16877 469 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 GEN1Q17RS7 908 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 TRIM71Q2Q1W2 868 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 KANK2Q63ZY3 851 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 RAB44Q7Z6P3 723 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 EGFL6Q8IUX8 553 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 GOLM1Q8NBJ4 401 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 ARRDC2Q8TBH0 407 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 SLC39A13Q96H72 371 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 ZYG11BQ9C0D3 744 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 SP110Q9HB58 689 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 SDR39U1Q9NRG7 319 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 TMEM248Q9NWD8 314 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 CEP350Q5VT06 3117 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 SAC3D1A6NKF1 404 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 CNTN5O94779 1100 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 GLP2RO95838 553 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 IL10P22301 178 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 SLC6A2P23975 617 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 RANBP1P43487 201 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 CDH15P55291 814 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 PLOD1Q02809 727 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 ACVR1Q04771 509 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 TNK2Q07912 1038 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 ILF2Q12905 390 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 BNIP2Q12982 314 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 TUSC3Q13454 348 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 OR4D1Q15615 310 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 KCTD21Q4G0X4 260 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 ALFQ53S48 1182 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 LCN8Q6JVE9 175 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 DDIASQ8IXT1 998 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 RHEBL1Q8TAI7 183 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 SLC45A3Q96JT2 553 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 TUBB1Q9H4B7 451 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 SMOXQ9NWM0 555 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 GALNT8Q9NY28 637 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 ACTR3BQ9P1U1 418 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 EGFL7Q9UHF1 273 aa16.82■□□□□ 0.28
PRKCSH-205ENST00000587327 LRRC14BA6NHZ5 514 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 UBXN8O00124 270 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 CD3EAPO15446 510 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 MATN4O95460 622 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 GNAO1P09471 354 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 ELNP15502 786 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 ZNF37AP17032 561 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 HOXB8P17481 243 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 PSMA4P25789 261 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 CST5P28325 142 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 SUOXP51687 545 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 DCTN2Q13561 401 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms