RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ARSEP51690 589 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 TAS2R40P59535 323 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 ACTR1AP61163 376 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 CTBSQ01459 385 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 ZFP36L1Q07352 338 aaKnown RBP20.36■□□□□ 0.85
TOP3A-219ENST00000584887 PAFAH1B3Q15102 231 aaKnown RBP20.36■□□□□ 0.85
TOP3A-219ENST00000584887 IFI16Q16666 785 aaKnown RBP20.36■□□□□ 0.85
TOP3A-219ENST00000584887 USP53Q70EK8 1073 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 TMPRSS9Q7Z410 1059 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 TECPR1Q7Z6L1 1165 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 LPCAT1Q8NF37 534 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 FAM71BQ8TC56 605 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 PATE1Q8WXA2 126 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 CTNNBL1Q8WYA6 563 aaPredicted RBP20.36■□□□□ 0.85
TOP3A-219ENST00000584887 SCAMP4Q969E2 229 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 OR2M4Q96R27 311 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 CCNL2Q96S94 520 aaPredicted RBP20.36■□□□□ 0.85
TOP3A-219ENST00000584887 ZNF670Q9BS34 389 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 CDH19Q9H159 772 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 SEMA6CQ9H3T2 930 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 SLC17A4Q9Y2C5 497 aa20.36■□□□□ 0.85
TOP3A-219ENST00000584887 HELZ2Q9BYK8 2649 aaKnown RBP20.35■□□□□ 0.85
TOP3A-219ENST00000584887 A0A0J9YYE9 177 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 K7ENP7 123 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 MATN3O15232 486 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 INPP4BO15327 924 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 TRBC1P01850 177 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 IVLP07476 585 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 CA4P22748 312 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 TEAD1P28347 426 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 ETV5P41161 510 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 PPM1FP49593 454 aaPredicted RBP20.35■□□□□ 0.85
TOP3A-219ENST00000584887 B4GALNT1Q00973 533 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 GBE1Q04446 702 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 DPTQ07507 201 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 LY6DQ14210 128 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 PDK2Q15119 407 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 TGIF1Q15583 401 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 INO80CQ6PI98 192 aaPredicted RBP20.35■□□□□ 0.85
TOP3A-219ENST00000584887 PIM3Q86V86 326 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 SLITRK4Q8IW52 837 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 MAP7D3Q8IWC1 876 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 CCNYQ8ND76 341 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 MAML1Q92585 1016 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 CMKLR1Q99788 373 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 PACSIN1Q9BY11 444 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 ZMYND15Q9H091 742 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 AKAP7Q9P0M2 348 aaPredicted RBP20.35■□□□□ 0.85
TOP3A-219ENST00000584887 UVRAGQ9P2Y5 699 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 PPIL1Q9Y3C6 166 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 PLEKHM1Q9Y4G2 1056 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.35■□□□□ 0.85
TOP3A-219ENST00000584887 ZNF462Q96JM2 2506 aa20.35■□□□□ 0.85
TOP3A-219ENST00000584887 PRAMEF33A0A0G2JMD5 474 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 CAPN8A6NHC0 703 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 B4GAT1O43505 415 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 FZD6O60353 706 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 PRAMEF10O60809 474 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 ASMTLO95671 621 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 CPNE6O95741 557 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 SOD1P00441 154 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 HLA-DQB2P05538 268 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 TPM3P06753 285 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 KRT7P08729 469 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 H2AFZP0C0S5 128 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 ZNF30P17039 623 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 CCNCP24863 283 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 ADAMTSL4Q6UY14 1074 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 H2AFVQ71UI9 128 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 ZNF605Q86T29 641 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 USP7Q93009 1102 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 TMEM159Q96B96 161 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 AGAP2Q99490 1192 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 NUDT22Q9BRQ3 303 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 RIOK2Q9BVS4 552 aaKnown RBP20.34■□□□□ 0.85
TOP3A-219ENST00000584887 TDRD1Q9BXT4 1180 aaKnown RBP20.34■□□□□ 0.85
TOP3A-219ENST00000584887 XPO4Q9C0E2 1151 aaKnown RBP20.34■□□□□ 0.85
TOP3A-219ENST00000584887 DEF6Q9H4E7 631 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 NENFQ9UMX5 172 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 SSUH2Q9Y2M2 353 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 COL6A6A6NMZ7 2263 aa20.34■□□□□ 0.85
TOP3A-219ENST00000584887 ZW10O43264 779 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 MX2P20592 715 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 CES1P23141 567 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 STC1P52823 247 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 PTSQ03393 145 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 NIPAL4Q0D2K0 466 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 SRSF6Q13247 344 aaKnown RBP20.33■□□□□ 0.85
TOP3A-219ENST00000584887 PEX6Q13608 980 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 IHHQ14623 411 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 C16orf72Q14CZ0 275 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 GALNT13Q8IUC8 556 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 PQLC3Q8N755 202 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 SNRNP27Q8WVK2 155 aaKnown RBP20.33■□□□□ 0.85
TOP3A-219ENST00000584887 TTC9Q92623 222 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 ZNF830Q96NB3 372 aaPredicted RBP20.33■□□□□ 0.85
TOP3A-219ENST00000584887 TSGA13Q96PP4 275 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 DNPEPQ9ULA0 475 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 ST14Q9Y5Y6 855 aa20.33■□□□□ 0.85
TOP3A-219ENST00000584887 SCN8AQ9UQD0 1980 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms