RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 SMIM14Q96QK8 99 aa13.11□□□□□ -0.31
ERBB2-220ENST00000584684 MLPHQ9BV36 600 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-220ENST00000584684 TMEM168Q9H0V1 697 aa13.11□□□□□ -0.31
ERBB2-220ENST00000584684 CYP4F12Q9HCS2 524 aa13.11□□□□□ -0.31
ERBB2-220ENST00000584684 MRPL40Q9NQ50 206 aaKnown RBP13.11□□□□□ -0.31
ERBB2-220ENST00000584684 NFKBIL1Q9UBC1 381 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-220ENST00000584684 EFR3BQ9Y2G0 817 aa13.11□□□□□ -0.31
ERBB2-220ENST00000584684 REXO2Q9Y3B8 237 aaKnown RBP13.11□□□□□ -0.31
ERBB2-220ENST00000584684 SCN8AQ9UQD0 1980 aa13.11□□□□□ -0.31
ERBB2-220ENST00000584684 A0A0U1RQS6 177 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 C1orf232A0A0U1RR37 186 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 RCCD1A6NED2 376 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 NTN3O00634 580 aaPredicted RBP13.1□□□□□ -0.31
ERBB2-220ENST00000584684 PJA2O43164 708 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 NOBOXO60393 691 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 CSO75390 466 aaKnown RBP13.1□□□□□ -0.31
ERBB2-220ENST00000584684 TNNT1P13805 278 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 PNLIPP16233 465 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 PTPN3P26045 913 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 GPR1P46091 355 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 VAV2P52735 878 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 PDX1P52945 283 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 DCDC1P59894 354 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 ILF3Q12906 894 aaKnown RBP eCLIP13.1□□□□□ -0.317e-6■■■■□ 19.9
ERBB2-220ENST00000584684 CERCAMQ5T4B2 595 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 HENMT1Q5T8I9 393 aaKnown RBP13.1□□□□□ -0.31
ERBB2-220ENST00000584684 RAD9BQ6WBX8 426 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 TAF8Q7Z7C8 310 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 C17orf82Q86X59 251 aaPredicted RBP13.1□□□□□ -0.31
ERBB2-220ENST00000584684 TMEM139Q8IV31 216 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 KIAA1524Q8TCG1 905 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 KRT35Q92764 455 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 P3H4Q92791 437 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 SCAMP4Q969E2 229 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 COX14Q96I36 57 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 TEKT5Q96M29 485 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 AGAP3Q96P47 875 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 QKIQ96PU8 341 aaKnown RBP eCLIP13.1□□□□□ -0.31
ERBB2-220ENST00000584684 VAT1Q99536 393 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 CCDC3Q9BQI4 270 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 GSDMCQ9BYG8 508 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 CEP41Q9BYV8 373 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 CDH19Q9H159 772 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 CARS2Q9HA77 564 aaKnown RBP13.1□□□□□ -0.31
ERBB2-220ENST00000584684 GLOD4Q9HC38 313 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 MAGEE1Q9HCI5 957 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 VPS18Q9P253 973 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 IMPACTQ9P2X3 320 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 APPL1Q9UKG1 709 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 SUFUQ9UMX1 484 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 TFR2Q9UP52 801 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 PCDHB1Q9Y5F3 818 aa13.1□□□□□ -0.31
ERBB2-220ENST00000584684 CCDC66A2RUB6 948 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 HACD1B0YJ81 288 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 APOC4-APOC2K7ER74 178 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 NUDT21O43809 227 aaKnown RBP13.09□□□□□ -0.31
ERBB2-220ENST00000584684 BRINP1O60477 761 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 CLDN7O95471 211 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 APOC2P02655 101 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 FUCA1P04066 466 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 GLB1P16278 677 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 CTNNA2P26232 953 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 LSSP48449 732 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 SPINT3P49223 89 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 CDK18Q07002 472 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 ADCY2Q08462 1091 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 WASHC5Q12768 1159 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 XRCC4Q13426 336 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 PEX6Q13608 980 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 LRP8Q14114 963 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 HLTFQ14527 1009 aaKnown RBP eCLIP13.09□□□□□ -0.31
ERBB2-220ENST00000584684 C14orf28Q4W4Y0 310 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 RFLNAQ6ZTI6 216 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 NRROSQ86YC3 692 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 LSMEM2Q8N112 164 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 LRRC57Q8N9N7 239 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 FAM46DQ8NEK8 389 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 CCHCR1Q8TD31 782 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 CCDC74AQ96AQ1 378 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 HIC2Q96JB3 615 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 WDR24Q96S15 920 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
ERBB2-220ENST00000584684 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-220ENST00000584684 RIOK2Q9BVS4 552 aaKnown RBP13.09□□□□□ -0.31
ERBB2-220ENST00000584684 PKD2L2Q9NZM6 624 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 SEPT10Q9P0V9 454 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 SIRPGQ9P1W8 387 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 SAE1Q9UBE0 346 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-220ENST00000584684 GULP1Q9UBP9 304 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 CD84Q9UIB8 345 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 PTPRQQ9UMZ3 2332 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
ERBB2-220ENST00000584684 ZFC3H1O60293 1989 aaKnown RBP13.09□□□□□ -0.31
ERBB2-220ENST00000584684 ADAMTS20P59510 1910 aa13.08□□□□□ -0.32
ERBB2-220ENST00000584684 GOLGA6CA6NDK9 693 aa13.08□□□□□ -0.32
ERBB2-220ENST00000584684 GOLGA6BA6NDN3 693 aa13.08□□□□□ -0.32
ERBB2-220ENST00000584684 D6RAR5 112 aa13.08□□□□□ -0.32
ERBB2-220ENST00000584684 USP12O75317 370 aa13.08□□□□□ -0.32
ERBB2-220ENST00000584684 NDST3O95803 873 aa13.08□□□□□ -0.32
ERBB2-220ENST00000584684 GOLGA6DP0CG33 693 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms