RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 ILF3Q12906 894 aaKnown RBP eCLIP3.84□□□□□ -1.792e-15■■■■□ 22.5
SKA2-210ENST00000584089 GRIK2Q13002 908 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 ZBTB17Q13105 803 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 DSTYKQ6XUX3 929 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 DPPA4Q7L190 304 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 SFR1Q86XK3 245 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 CCDC13Q8IYE1 715 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 KCNH5Q8NCM2 988 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 LNX1Q8TBB1 728 aaPredicted RBP3.84□□□□□ -1.79
SKA2-210ENST00000584089 KCNG4Q8TDN1 519 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 SORCS1Q8WY21 1168 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 IGSF8Q969P0 613 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 ARHGEF26Q96DR7 871 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 RRNAD1Q96FB5 475 aaKnown RBP3.84□□□□□ -1.79
SKA2-210ENST00000584089 PPP1R13BQ96KQ4 1090 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 ACOX2Q99424 681 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 PKP4Q99569 1192 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 NAP1L4Q99733 375 aaKnown RBP3.84□□□□□ -1.79
SKA2-210ENST00000584089 PCGF1Q9BSM1 259 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 POLR3GLQ9BT43 218 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 OLA1Q9NTK5 396 aaKnown RBP3.84□□□□□ -1.79
SKA2-210ENST00000584089 ACSS1Q9NUB1 689 aaPredicted RBP3.84□□□□□ -1.79
SKA2-210ENST00000584089 TMEM30AQ9NV96 361 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 CNOT8Q9UFF9 292 aaKnown RBP3.84□□□□□ -1.79
SKA2-210ENST00000584089 LIMA1Q9UHB6 759 aaKnown RBP3.84□□□□□ -1.79
SKA2-210ENST00000584089 KCNE2Q9Y6J6 123 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 CGNL1Q0VF96 1302 aa3.84□□□□□ -1.79
SKA2-210ENST00000584089 TDRD9Q8NDG6 1382 aaKnown RBP3.84□□□□□ -1.79
SKA2-210ENST00000584089 A0A087X0M5 115 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 A0A1B0GX30 115 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 A0A1W2PQF6 199 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 PRAC2D3DTV9 90 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 SPINT2O43291 252 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 F7P08709 466 aaPredicted RBP3.83□□□□□ -1.8
SKA2-210ENST00000584089 IL7RP16871 459 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 S1PR1P21453 382 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 PAX3P23760 479 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 CHMP24386 653 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 MAN1A1P33908 653 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 PBX3P40426 434 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 F2RL1P55085 397 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 NLRP5P59047 1200 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 FOXM1Q08050 763 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 DDX10Q13206 875 aaKnown RBP3.83□□□□□ -1.8
SKA2-210ENST00000584089 ZNF718Q3SXZ3 478 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 ZNF672Q499Z4 452 aaPredicted RBP3.83□□□□□ -1.8
SKA2-210ENST00000584089 KCNT1Q5JUK3 1230 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 TRNP1Q6NT89 227 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 DUS1LQ6P1R4 473 aaKnown RBP3.83□□□□□ -1.8
SKA2-210ENST00000584089 CYP20A1Q6UW02 462 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 SATL1Q86VE3 508 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 ZNF441Q8N8Z8 693 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 TEX19Q8NA77 164 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 POC1AQ8NBT0 407 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 PPHLN1Q8NEY8 458 aaKnown RBP3.83□□□□□ -1.8
SKA2-210ENST00000584089 OR2AK2Q8NG84 335 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 OR14L1PQ8NHC6 308 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 SGCDQ92629 289 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 ABTB1Q969K4 478 aaPredicted RBP3.83□□□□□ -1.8
SKA2-210ENST00000584089 PERPQ96FX8 193 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 CMKLR1Q99788 373 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 EVA1AQ9H8M9 152 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 DIAPH3Q9NSV4 1193 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 EHD2Q9NZN4 543 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 AASSQ9UDR5 926 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 ACSL5Q9ULC5 683 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 AMDHD2Q9Y303 409 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 LOXL2Q9Y4K0 774 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 PSAT1Q9Y617 370 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 MAU2Q9Y6X3 613 aa3.83□□□□□ -1.8
SKA2-210ENST00000584089 PDS5AQ29RF7 1337 aaKnown RBP3.83□□□□□ -1.8
SKA2-210ENST00000584089 FAM237BA0A1B0GVD1 139 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 LILRA5A6NI73 299 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 IFITM10A6NMD0 228 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 F5H0A9 414 aaPredicted RBP3.82□□□□□ -1.8
SKA2-210ENST00000584089 BUB3O43684 328 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 JRKO75564 520 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 SLC25A12O75746 678 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 DDNO94850 711 aaPredicted RBP3.82□□□□□ -1.8
SKA2-210ENST00000584089 DDX58O95786 925 aaKnown RBP3.82□□□□□ -1.8
SKA2-210ENST00000584089 EGFP01133 1207 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 CDH2P19022 906 aaPredicted RBP3.82□□□□□ -1.8
SKA2-210ENST00000584089 UBA1P22314 1058 aaKnown RBP3.82□□□□□ -1.8
SKA2-210ENST00000584089 DGKAP23743 735 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 TMPOP42166 694 aaKnown RBP3.82□□□□□ -1.8
SKA2-210ENST00000584089 ZBED6P86452 979 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 PDE1BQ01064 536 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 CEBPZQ03701 1054 aaKnown RBP3.82□□□□□ -1.8
SKA2-210ENST00000584089 SLC20A2Q08357 652 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 NIPAL4Q0D2K0 466 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 TROAPQ12815 778 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 ZRSR1Q15695 479 aaKnown RBP3.82□□□□□ -1.8
SKA2-210ENST00000584089 ADIPOQQ15848 244 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 DECR1Q16698 335 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 CDONQ4KMG0 1287 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 SOWAHCQ53LP3 525 aaPredicted RBP3.82□□□□□ -1.8
SKA2-210ENST00000584089 FAAH2Q6GMR7 532 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 BRAT1Q6PJG6 821 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 GFRALQ6UXV0 394 aa3.82□□□□□ -1.8
SKA2-210ENST00000584089 ARHGAP12Q8IWW6 846 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms